RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 TAF3Q5VWG9 929 aa22.39■■□□□ 1.17
TGFBR1-201ENST00000374990 SEPT11Q9NVA2 429 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-201ENST00000374990 PLEKHF1Q96S99 279 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 SYNMO15061 1565 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 IRS4O14654 1257 aaPredicted RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 ZNF830Q96NB3 372 aaPredicted RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 UTP14AQ9BVJ6 771 aaKnown RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 SKIDA1Q1XH10 827 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 EHBP1Q8NDI1 1231 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 EIF4A1P60842 406 aaKnown RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 CBX1P83916 185 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 BMS1Q14692 1282 aaKnown RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 CALML3P27482 149 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 CUL5Q93034 780 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
TGFBR1-201ENST00000374990 WWC2Q6AWC2 1192 aa22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 MARCKSP29966 332 aaPredicted RBP22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 SLC27A2O14975 620 aa22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 TDRD12Q587J7 1177 aaKnown RBP22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 SSH2Q76I76 1423 aa22.37■■□□□ 1.17
TGFBR1-201ENST00000374990 KBTBD3Q8NAB2 608 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 NIP7Q9Y221 180 aaKnown RBP eCLIP22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 USP44Q9H0E7 712 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 CPA1P15085 419 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 DBNDD2Q9BQY9 259 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 TTC37Q6PGP7 1564 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 PPP4R3BQ5MIZ7 849 aa22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 SRRTQ9BXP5 876 aaKnown RBP22.36■■□□□ 1.17
TGFBR1-201ENST00000374990 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 A0A1B0GUL7 405 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 CENPHQ9H3R5 247 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 FAM193AP78312 1265 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 FAM160A1Q05DH4 1040 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 HLA-DOAP06340 250 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 ATP6V1AP38606 617 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 CETN2P41208 172 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 GCKRQ14397 625 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 RTL9Q8NET4 1388 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 SAMD9LQ8IVG5 1584 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 TIMM10P62072 90 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 TRIM47Q96LD4 638 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 ALS2CR12Q96Q35 445 aa22.35■■□□□ 1.17
TGFBR1-201ENST00000374990 DDB1Q16531 1140 aa22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 GTPBP4Q9BZE4 634 aaKnown RBP22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 SETDB2Q96T68 719 aa22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 LMOD1P29536 600 aaPredicted RBP22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 RBSNQ9H1K0 784 aa22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 SLC52A2Q9HAB3 445 aa22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 BRD1O95696 1058 aa22.34■■□□□ 1.17
TGFBR1-201ENST00000374990 CCDC40Q4G0X9 1142 aa22.33■■□□□ 1.17
TGFBR1-201ENST00000374990 PSMA7O14818 248 aa22.33■■□□□ 1.17
TGFBR1-201ENST00000374990 APPBP2Q92624 585 aa22.33■■□□□ 1.17
TGFBR1-201ENST00000374990 TRAF1Q13077 416 aa22.33■■□□□ 1.16
TGFBR1-201ENST00000374990 TMEM87BQ96K49 555 aa22.33■■□□□ 1.16
TGFBR1-201ENST00000374990 EHMT1Q9H9B1 1298 aa22.33■■□□□ 1.16
TGFBR1-201ENST00000374990 POTEJP0CG39 1038 aa22.33■■□□□ 1.16
TGFBR1-201ENST00000374990 RFC4P35249 363 aa22.33■■□□□ 1.16
TGFBR1-201ENST00000374990 CHST3Q7LGC8 479 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 LUZP1Q86V48 1076 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 NAA15Q9BXJ9 866 aaKnown RBP22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 LMBRD1Q9NUN5 540 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 FAM135BQ49AJ0 1406 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 CETN1Q12798 172 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 RRAGBQ5VZM2 374 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 SUCLG2Q96I99 432 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
TGFBR1-201ENST00000374990 TSPY3P0CV98 308 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 TSPY8P0CW00 308 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 VAT1LQ9HCJ6 419 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 GOLGA6L7A0A1B0GV03 622 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 AFMP43652 599 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 CFAP65Q6ZU64 1925 aaKnown RBP22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 USP8P40818 1118 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 UBA5Q9GZZ9 404 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 EXOC1Q9NV70 894 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 TRIM21P19474 475 aaKnown RBP22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 STAT6P42226 847 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 FAM227BQ96M60 508 aa22.31■■□□□ 1.16
TGFBR1-201ENST00000374990 CYLC1P35663 651 aaPredicted RBP22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 STXBP4Q6ZWJ1 553 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 DNAI1Q9UI46 699 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 AKR1B10O60218 316 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 NYXQ9GZU5 481 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 NEFHP12036 1026 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 RILPL1Q5EBL4 403 aa22.3■■□□□ 1.16
TGFBR1-201ENST00000374990 SLU7O95391 586 aaKnown RBP22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 ATP5JP18859 108 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 KRI1Q8N9T8 703 aaKnown RBP22.29■■□□□ 1.16
TGFBR1-201ENST00000374990 PLA2R1Q13018 1463 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms