RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 RAPGEFL1Q9UHV5 662 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 VCANP13611 3396 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 SH3TC1Q8TE82 1336 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 ECM29Q5VYK3 1845 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 SASH1O94885 1247 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 MAP3K11Q16584 847 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 ARHGAP39Q9C0H5 1083 aa13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 TRMT112Q9UI30 125 aaKnown RBP13.42□□□□□ -0.26
HLA-DRA-201ENST00000374982 UFL1O94874 794 aa13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 FARP2O94887 1054 aaPredicted RBP13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 PRKAR2BP31323 418 aa13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 BMP8BP34820 402 aa13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 BCAMP50895 628 aa13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 GDF15Q99988 308 aa13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
HLA-DRA-201ENST00000374982 RPTORQ8N122 1335 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 USP17L3A6NCW0 530 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 USP17L4A6NCW7 530 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 GJB1P08034 283 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 PLA2G5P39877 138 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 SPTBN5Q9NRC6 3674 aaKnown RBP13.4□□□□□ -0.26
HLA-DRA-201ENST00000374982 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
HLA-DRA-201ENST00000374982 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
HLA-DRA-201ENST00000374982 MXD3Q9BW11 206 aa13.39□□□□□ -0.27
HLA-DRA-201ENST00000374982 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
HLA-DRA-201ENST00000374982 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 CCL5P13501 91 aa13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 LACTBP83111 547 aaPredicted RBP13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 OGFOD1Q8N543 542 aa13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
HLA-DRA-201ENST00000374982 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 UNCXA6NJT0 531 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 KIF22Q14807 665 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 GUCD1Q96NT3 240 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
HLA-DRA-201ENST00000374982 GNRH1P01148 92 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 GRK4P32298 578 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 PRMT2P55345 433 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 FAM122AQ96E09 287 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 DEFB129Q9H1M3 183 aa13.36□□□□□ -0.27
HLA-DRA-201ENST00000374982 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 DACT2Q5SW24 774 aa13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 TDHQ8IZJ6 230 aa13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
HLA-DRA-201ENST00000374982 ANXA1P04083 346 aa13.34□□□□□ -0.27
HLA-DRA-201ENST00000374982 PDIA6Q15084 440 aa13.34□□□□□ -0.27
HLA-DRA-201ENST00000374982 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
HLA-DRA-201ENST00000374982 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
HLA-DRA-201ENST00000374982 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 TLR2O60603 784 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 CCL15Q16663 113 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 PROSER3Q2NL68 480 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 ZBED3Q96IU2 234 aaPredicted RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 SRRDQ9UH36 339 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 IRS2Q9Y4H2 1338 aa13.33□□□□□ -0.28
HLA-DRA-201ENST00000374982 MGAMO43451 1857 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 EYSQ5T1H1 3165 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 SGPL1O95470 568 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 CTGFP29279 349 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 RAET1EQ8TD07 263 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 FAM89AQ96GI7 184 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 SPEF2Q9C093 1822 aa13.32□□□□□ -0.28
HLA-DRA-201ENST00000374982 MAGEA10P43363 369 aaPredicted RBP13.31□□□□□ -0.28
HLA-DRA-201ENST00000374982 UBXN2AP68543 259 aa13.31□□□□□ -0.28
HLA-DRA-201ENST00000374982 NBPF12Q5TAG4 269 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms