RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 KLHL23Q8NBE8 558 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 PBX4Q9BYU1 374 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 ABI2Q9NYB9 513 aaPredicted RBP8.55□□□□□ -1.04
PMS1-202ENST00000374826 STIM2Q9P246 746 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 FAM46AQ96IP4 442 aaKnown RBP8.54□□□□□ -1.04
PMS1-202ENST00000374826 CARD10Q9BWT7 1032 aa8.54□□□□□ -1.04
PMS1-202ENST00000374826 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
PMS1-202ENST00000374826 KIAA1324LA8MWY0 1029 aaPredicted RBP8.53□□□□□ -1.04
PMS1-202ENST00000374826 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
PMS1-202ENST00000374826 NFIAQ12857 509 aa8.53□□□□□ -1.04
PMS1-202ENST00000374826 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
PMS1-202ENST00000374826 UVSSAQ2YD98 709 aa8.53□□□□□ -1.04
PMS1-202ENST00000374826 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
PMS1-202ENST00000374826 ZDHHC13Q8IUH4 622 aa8.53□□□□□ -1.04
PMS1-202ENST00000374826 POP1Q99575 1024 aaKnown RBP8.53□□□□□ -1.04
PMS1-202ENST00000374826 BTBD11A6QL63 1104 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 DDX3YO15523 660 aaKnown RBP8.52□□□□□ -1.05
PMS1-202ENST00000374826 PAX4O43316 350 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 EPHA1P21709 976 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 NCAPG2Q86XI2 1143 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 TRIM42Q8IWZ5 723 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
PMS1-202ENST00000374826 PBXIP1Q96AQ6 731 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 KLHDC7BQ96G42 594 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 C7orf69Q9H7B7 122 aa8.52□□□□□ -1.05
PMS1-202ENST00000374826 MYO15BQ96JP2 1530 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 HMX2A2RU54 273 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 ATG7O95352 703 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 MYRFLQ96LU7 910 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
PMS1-202ENST00000374826 OAS3Q9Y6K5 1087 aaKnown RBP8.51□□□□□ -1.05
PMS1-202ENST00000374826 PTPRAP18433 802 aa8.5□□□□□ -1.05
PMS1-202ENST00000374826 IRAK1P51617 712 aa8.5□□□□□ -1.05
PMS1-202ENST00000374826 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
PMS1-202ENST00000374826 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
PMS1-202ENST00000374826 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
PMS1-202ENST00000374826 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
PMS1-202ENST00000374826 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
PMS1-202ENST00000374826 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 FAM177BA6PVY3 158 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 ADAM11O75078 769 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
PMS1-202ENST00000374826 TMEM164Q5U3C3 297 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
PMS1-202ENST00000374826 FAM83CQ9BQN1 747 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 KRTAP9-9Q9BYP9 154 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 KRTAP9-4Q9BYQ2 154 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
PMS1-202ENST00000374826 GRIK1P39086 918 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 FAM20CQ8IXL6 584 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 WNT8BQ93098 351 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
PMS1-202ENST00000374826 FMNL2Q96PY5 1086 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 DBNDD2Q9BQY9 259 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 C1orf115Q9H7X2 142 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 SALL4Q9UJQ4 1053 aa8.48□□□□□ -1.05
PMS1-202ENST00000374826 ADAMTS4O75173 837 aa8.47□□□□□ -1.05
PMS1-202ENST00000374826 TAL1P17542 331 aaPredicted RBP8.47□□□□□ -1.05
PMS1-202ENST00000374826 TXKP42681 527 aa8.47□□□□□ -1.05
PMS1-202ENST00000374826 XKR5Q6UX68 686 aa8.47□□□□□ -1.05
PMS1-202ENST00000374826 OSGEPQ9NPF4 335 aa8.47□□□□□ -1.05
PMS1-202ENST00000374826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
PMS1-202ENST00000374826 H3BRJ5 948 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 NFKBIEO00221 500 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 SART1O43290 800 aaKnown RBP8.46□□□□□ -1.06
PMS1-202ENST00000374826 BMP3P12645 472 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 SPINK2P20155 84 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 CABP4P57796 275 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 KANSL3Q9P2N6 904 aa8.46□□□□□ -1.06
PMS1-202ENST00000374826 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
PMS1-202ENST00000374826 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
PMS1-202ENST00000374826 BEND4Q6ZU67 534 aa8.45□□□□□ -1.06
PMS1-202ENST00000374826 ATCAYQ86WG3 371 aa8.45□□□□□ -1.06
PMS1-202ENST00000374826 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
PMS1-202ENST00000374826 SLAIN2Q9P270 581 aa8.45□□□□□ -1.06
PMS1-202ENST00000374826 SCRIBQ14160 1630 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
PMS1-202ENST00000374826 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 RNF208Q9H0X6 261 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 DZANK1Q9NVP4 752 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 SEPT3Q9UH03 358 aa8.44□□□□□ -1.06
PMS1-202ENST00000374826 CES1P23141 567 aa8.43□□□□□ -1.06
PMS1-202ENST00000374826 SHKBP1Q8TBC3 707 aa8.43□□□□□ -1.06
PMS1-202ENST00000374826 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
PMS1-202ENST00000374826 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
PMS1-202ENST00000374826 PDE2AO00408 941 aaPredicted RBP8.42□□□□□ -1.06
PMS1-202ENST00000374826 WNT11O96014 354 aa8.42□□□□□ -1.06
PMS1-202ENST00000374826 ACPPP15309 386 aa8.42□□□□□ -1.06
PMS1-202ENST00000374826 PREPP48147 710 aa8.42□□□□□ -1.06
PMS1-202ENST00000374826 RUSC1Q9BVN2 902 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms