RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 MPNDQ8N594 471 aa14.36□□□□□ -0.11
ABCA1-201ENST00000374733 LAMB2P55268 1798 aa14.35□□□□□ -0.11
ABCA1-201ENST00000374733 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
ABCA1-201ENST00000374733 ABCC4O15439 1325 aa14.35□□□□□ -0.11
ABCA1-201ENST00000374733 DDX60Q8IY21 1712 aaKnown RBP14.35□□□□□ -0.11
ABCA1-201ENST00000374733 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 EVI5O60447 810 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 FKBP1BP68106 108 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 ARMC5Q96C12 935 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 LAMB4A4D0S4 1761 aa14.34□□□□□ -0.11
ABCA1-201ENST00000374733 TAF1P21675 1872 aa14.33□□□□□ -0.11
ABCA1-201ENST00000374733 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.12
ABCA1-201ENST00000374733 NUDT7P0C024 238 aa14.33□□□□□ -0.12
ABCA1-201ENST00000374733 CFHR5Q9BXR6 569 aa14.33□□□□□ -0.12
ABCA1-201ENST00000374733 DBNDD1Q9H9R9 158 aa14.33□□□□□ -0.12
ABCA1-201ENST00000374733 PTPN22Q9Y2R2 807 aa14.33□□□□□ -0.12
ABCA1-201ENST00000374733 IBTKQ9P2D0 1353 aaPredicted RBP14.33□□□□□ -0.12
ABCA1-201ENST00000374733 KDM3BQ7LBC6 1761 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 VCANP13611 3396 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
ABCA1-201ENST00000374733 TTLL12Q14166 644 aaPredicted RBP14.32□□□□□ -0.12
ABCA1-201ENST00000374733 PDIA6Q15084 440 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
ABCA1-201ENST00000374733 SUSD4Q5VX71 490 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 KHSRPQ92945 711 aaKnown RBP eCLIP14.32□□□□□ -0.12
ABCA1-201ENST00000374733 ZNF609O15014 1411 aa14.32□□□□□ -0.12
ABCA1-201ENST00000374733 RPS12P25398 132 aaKnown RBP14.31□□□□□ -0.12
ABCA1-201ENST00000374733 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
ABCA1-201ENST00000374733 SCN9AQ15858 1988 aa14.31□□□□□ -0.12
ABCA1-201ENST00000374733 LRRC37AA6NMS7 1700 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 ANKRD36CQ5JPF3 1778 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 NTSR2O95665 410 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 EMP3P54852 163 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 LCE2DQ5TA82 110 aaPredicted RBP14.3□□□□□ -0.12
ABCA1-201ENST00000374733 SP8Q8IXZ3 490 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 CD99L2Q8TCZ2 262 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
ABCA1-201ENST00000374733 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
ABCA1-201ENST00000374733 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
ABCA1-201ENST00000374733 SLC4A8Q2Y0W8 1093 aa14.29□□□□□ -0.12
ABCA1-201ENST00000374733 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
ABCA1-201ENST00000374733 SOX1O00570 391 aaPredicted RBP14.28□□□□□ -0.12
ABCA1-201ENST00000374733 SCARF1Q14162 830 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 MAP3K15Q6ZN16 1313 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 GAS2L2Q8NHY3 880 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 CEMIPQ8WUJ3 1361 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 ERO1AQ96HE7 468 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 LRCH3Q96II8 777 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 ZNF333Q96JL9 665 aa14.28□□□□□ -0.12
ABCA1-201ENST00000374733 ERVV-1B6SEH8 477 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 ECE2O60344 883 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 BBOX1O75936 387 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 DPF3Q92784 378 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 EFCC1Q9HA90 598 aa14.27□□□□□ -0.13
ABCA1-201ENST00000374733 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
ABCA1-201ENST00000374733 MARVELD3Q96A59 401 aa14.26□□□□□ -0.13
ABCA1-201ENST00000374733 PANK3Q9H999 370 aa14.26□□□□□ -0.13
ABCA1-201ENST00000374733 TCIRG1Q13488 830 aa14.25□□□□□ -0.13
ABCA1-201ENST00000374733 SLC9C1Q4G0N8 1177 aa14.25□□□□□ -0.13
ABCA1-201ENST00000374733 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
ABCA1-201ENST00000374733 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
ABCA1-201ENST00000374733 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
ABCA1-201ENST00000374733 LAMB1P07942 1786 aa14.24□□□□□ -0.13
ABCA1-201ENST00000374733 PSME4Q14997 1843 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
ABCA1-201ENST00000374733 CAP1Q01518 475 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 PTPN12Q05209 780 aaKnown RBP14.23□□□□□ -0.13
ABCA1-201ENST00000374733 GRAPQ13588 217 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 PRKG1Q13976 671 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 SPRYD7Q5W111 196 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
ABCA1-201ENST00000374733 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 GRAPLQ8TC17 118 aaPredicted RBP14.23□□□□□ -0.13
ABCA1-201ENST00000374733 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
ABCA1-201ENST00000374733 WTIPA6NIX2 430 aaPredicted RBP14.22□□□□□ -0.13
ABCA1-201ENST00000374733 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
ABCA1-201ENST00000374733 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
ABCA1-201ENST00000374733 NF2P35240 595 aa14.22□□□□□ -0.13
ABCA1-201ENST00000374733 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
ABCA1-201ENST00000374733 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
ABCA1-201ENST00000374733 PTCH2Q9Y6C5 1203 aa14.22□□□□□ -0.13
ABCA1-201ENST00000374733 VIL1P09327 827 aaKnown RBP14.21□□□□□ -0.13
ABCA1-201ENST00000374733 MYL6BP14649 208 aa14.21□□□□□ -0.13
ABCA1-201ENST00000374733 ZNF280AP59817 542 aaPredicted RBP14.21□□□□□ -0.13
ABCA1-201ENST00000374733 CRHR2Q13324 411 aa14.21□□□□□ -0.13
ABCA1-201ENST00000374733 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
ABCA1-201ENST00000374733 MANSC4A6NHS7 340 aaPredicted RBP14.2□□□□□ -0.14
ABCA1-201ENST00000374733 U2SURPO15042 1029 aaKnown RBP14.2□□□□□ -0.14
ABCA1-201ENST00000374733 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
ABCA1-201ENST00000374733 PARP10Q53GL7 1025 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms