RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
UBXN11-204ENST00000374217 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
UBXN11-204ENST00000374217 CGNQ9P2M7 1197 aaKnown RBP17.7■□□□□ 0.42
UBXN11-204ENST00000374217 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
UBXN11-204ENST00000374217 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 APBB1O00213 710 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 TTC14Q96N46 770 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 KCNF1Q9H3M0 494 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 GDPD2Q9HCC8 539 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
UBXN11-204ENST00000374217 PNMA6EA0A0J9YXQ4 647 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 CASP7P55210 303 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 ZSCAN31Q96LW9 406 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-204ENST00000374217 C4AP0C0L4 1744 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 SYT1P21579 422 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-204ENST00000374217 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 SH2B1Q9NRF2 756 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-204ENST00000374217 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
UBXN11-204ENST00000374217 ELP1O95163 1332 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 NPHP1O15259 732 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 RAB11FIP3O75154 756 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 CAVIN2O95810 425 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
UBXN11-204ENST00000374217 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 CREBRFQ8IUR6 639 aa17.67■□□□□ 0.42
UBXN11-204ENST00000374217 IRS4O14654 1257 aaPredicted RBP17.66■□□□□ 0.42
UBXN11-204ENST00000374217 MTX1Q13505 466 aa17.66■□□□□ 0.42
UBXN11-204ENST00000374217 CDHR2Q9BYE9 1310 aa17.66■□□□□ 0.42
UBXN11-204ENST00000374217 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-204ENST00000374217 COL23A1Q86Y22 540 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-204ENST00000374217 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 UPF3BQ9BZI7 483 aaKnown RBP17.65■□□□□ 0.42
UBXN11-204ENST00000374217 NYXQ9GZU5 481 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 PYCARDQ9ULZ3 195 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 GYS1P13807 737 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 TSC1Q92574 1164 aa17.65■□□□□ 0.42
UBXN11-204ENST00000374217 SGSM2O43147 1006 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 FOXO4P98177 505 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 POLA2Q14181 598 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 TPTE2Q6XPS3 522 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.41
UBXN11-204ENST00000374217 PNPLA7Q6ZV29 1317 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
UBXN11-204ENST00000374217 NTSR2O95665 410 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 NCBP1Q09161 790 aaKnown RBP17.63■□□□□ 0.41
UBXN11-204ENST00000374217 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-204ENST00000374217 NUTM1Q86Y26 1132 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-204ENST00000374217 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 NEMFO60524 1076 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 PDE8AO60658 829 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-204ENST00000374217 NFIXQ14938 502 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
UBXN11-204ENST00000374217 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 CDC25BP30305 580 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 NOL8Q76FK4 1167 aaKnown RBP17.62■□□□□ 0.41
UBXN11-204ENST00000374217 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
UBXN11-204ENST00000374217 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
UBXN11-204ENST00000374217 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
UBXN11-204ENST00000374217 FIBPO43427 364 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 U2AF2P26368 475 aaKnown RBP eCLIP17.61■□□□□ 0.41
UBXN11-204ENST00000374217 AK2P54819 239 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 CTSWP56202 376 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 RBM43Q6ZSC3 357 aaKnown RBP17.61■□□□□ 0.41
UBXN11-204ENST00000374217 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
UBXN11-204ENST00000374217 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
UBXN11-204ENST00000374217 DDX19AQ9NUU7 478 aaKnown RBP17.61■□□□□ 0.41
UBXN11-204ENST00000374217 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
UBXN11-204ENST00000374217 AP5Z1O43299 807 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 PDCP20941 246 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 KRT85P78386 507 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 RUFY2Q8WXA3 655 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 KCNB2Q92953 911 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 NUP62CLQ9H1M0 184 aa17.6■□□□□ 0.41
UBXN11-204ENST00000374217 CCDC66A2RUB6 948 aa17.59■□□□□ 0.41
UBXN11-204ENST00000374217 G3BP1Q13283 466 aaKnown RBP eCLIP17.59■□□□□ 0.41
UBXN11-204ENST00000374217 TAF7LQ5H9L4 462 aa17.59■□□□□ 0.41
UBXN11-204ENST00000374217 CCDC112Q8NEF3 446 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms