RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 CTAGE9A4FU28 777 aa20.49■□□□□ 0.87
COL16A1-203ENST00000373672 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
COL16A1-203ENST00000373672 SREK1Q8WXA9 508 aaKnown RBP20.49■□□□□ 0.87
COL16A1-203ENST00000373672 OPA1O60313 960 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 MYCNP04198 464 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-203ENST00000373672 CALML3P27482 149 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 KRT2P35908 639 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 RNF216Q9NWF9 866 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-203ENST00000373672 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 TYRO3Q06418 890 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 BICDL2A1A5D9 508 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 CLCN1P35523 988 aa20.48■□□□□ 0.87
COL16A1-203ENST00000373672 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-203ENST00000373672 FBLN1P23142 703 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 SMARCC2Q8TAQ2 1214 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 STMN4Q9H169 189 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-203ENST00000373672 PABPN1LA6NDY0 278 aaKnown RBP20.47■□□□□ 0.87
COL16A1-203ENST00000373672 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-203ENST00000373672 PHACTR2O75167 634 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 GOLGA1Q92805 767 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
COL16A1-203ENST00000373672 ATP6V1AP38606 617 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 CCDC77Q9BR77 488 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 HDAC9Q9UKV0 1011 aa20.47■□□□□ 0.87
COL16A1-203ENST00000373672 SLU7O95391 586 aaKnown RBP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 LRRC45Q96CN5 670 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 ZKSCAN5Q9Y2L8 839 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 KRT86O43790 486 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 MRVI1Q9Y6F6 885 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 IVLP07476 585 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 HSPA4P34932 840 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 AK2P54819 239 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 RRP36Q96EU6 259 aaKnown RBP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 RAD50Q92878 1312 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 IQCGQ9H095 443 aaKnown RBP20.46■□□□□ 0.87
COL16A1-203ENST00000373672 PTGS1P23219 599 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 CREB3L3Q68CJ9 461 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 DCTPP1Q9H773 170 aa20.46■□□□□ 0.87
COL16A1-203ENST00000373672 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 LINS1Q8NG48 757 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 PA2G4Q9UQ80 394 aaKnown RBP20.45■□□□□ 0.86
COL16A1-203ENST00000373672 KIF5AQ12840 1032 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 TUBB4BP68371 445 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 KRT79Q5XKE5 535 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 SMC5Q8IY18 1101 aa20.45■□□□□ 0.86
COL16A1-203ENST00000373672 KIF4AO95239 1232 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 PICALMQ13492 652 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 PARD3Q8TEW0 1356 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 RUFY3Q7L099 469 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 FBF1Q8TES7 1133 aa20.44■□□□□ 0.86
COL16A1-203ENST00000373672 APOBRQ0VD83 1088 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 NYXQ9GZU5 481 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 LMOD1P29536 600 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 NIP7Q9Y221 180 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 MSH6P52701 1360 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 RGS22Q8NE09 1264 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 CCDC42Q96M95 316 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 PPM1FP49593 454 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-203ENST00000373672 IMPG2Q9BZV3 1241 aa20.43■□□□□ 0.86
COL16A1-203ENST00000373672 UBXN1Q04323 297 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 MCM6Q14566 821 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 NEK11Q8NG66 645 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 TIGD1Q96MW7 591 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 ATP2C2O75185 946 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 CCDC129Q6ZRS4 1044 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
COL16A1-203ENST00000373672 F8W031 263 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-203ENST00000373672 DHX32Q7L7V1 743 aaKnown RBP20.42■□□□□ 0.86
COL16A1-203ENST00000373672 FLT4P35916 1363 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
COL16A1-203ENST00000373672 ATP2A1O14983 1001 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 PAXIP1Q6ZW49 1069 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-203ENST00000373672 SSX2IPQ9Y2D8 614 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
COL16A1-203ENST00000373672 PLCG2P16885 1265 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
COL16A1-203ENST00000373672 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 MAP3K5Q99683 1374 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 SPDYE3A6NKU9 549 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 FAM13AO94988 1023 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 HS1BP3Q53T59 392 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 PAIP2Q9BPZ3 127 aaKnown RBP20.41■□□□□ 0.86
COL16A1-203ENST00000373672 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
COL16A1-203ENST00000373672 PRAG1Q86YV5 1406 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms