RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 ELL2O00472 640 aaPredicted RBP9.85□□□□□ -0.83
SP140-202ENST00000373645 SLC10A3P09131 477 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 ZNF157P51786 506 aaPredicted RBP9.85□□□□□ -0.83
SP140-202ENST00000373645 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 KIF4BQ2VIQ3 1234 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 DPF2Q92785 391 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 FAM89AQ96GI7 184 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 CHPF2Q9P2E5 772 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
SP140-202ENST00000373645 AKAP11Q9UKA4 1901 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 MOB2Q70IA6 237 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 C2orf69Q8N8R5 385 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 CSRNP1Q96S65 589 aa9.84□□□□□ -0.83
SP140-202ENST00000373645 HOXB7P09629 217 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 RARSP54136 660 aaKnown RBP9.83□□□□□ -0.84
SP140-202ENST00000373645 HSP90AB3PQ58FF7 597 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 RASAL3Q86YV0 1011 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 TBC1D16Q8TBP0 767 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 DCPSQ96C86 337 aaKnown RBP9.83□□□□□ -0.84
SP140-202ENST00000373645 CDCA5Q96FF9 252 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 SEC31BQ9NQW1 1179 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 SAGE1Q9NXZ1 904 aa9.83□□□□□ -0.84
SP140-202ENST00000373645 WTIPA6NIX2 430 aaPredicted RBP9.82□□□□□ -0.84
SP140-202ENST00000373645 RPS12P25398 132 aaKnown RBP9.82□□□□□ -0.84
SP140-202ENST00000373645 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
SP140-202ENST00000373645 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
SP140-202ENST00000373645 ANGEL2Q5VTE6 544 aaKnown RBP9.82□□□□□ -0.84
SP140-202ENST00000373645 PRAMEF18Q5VWM3 479 aa9.82□□□□□ -0.84
SP140-202ENST00000373645 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
SP140-202ENST00000373645 ISCA1Q9BUE6 129 aa9.82□□□□□ -0.84
SP140-202ENST00000373645 PAPPA2Q9BXP8 1791 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 UFL1O94874 794 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 VIL1P09327 827 aaKnown RBP9.81□□□□□ -0.84
SP140-202ENST00000373645 C7P10643 843 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 CCDC30Q5VVM6 783 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 TMC4Q7Z404 712 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 CTU1Q7Z7A3 348 aaKnown RBP9.81□□□□□ -0.84
SP140-202ENST00000373645 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 PLBD2Q8NHP8 589 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
SP140-202ENST00000373645 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
SP140-202ENST00000373645 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
SP140-202ENST00000373645 IRS4O14654 1257 aaPredicted RBP9.8□□□□□ -0.84
SP140-202ENST00000373645 BCAR3O75815 825 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 MKRN3Q13064 507 aaKnown RBP9.8□□□□□ -0.84
SP140-202ENST00000373645 SCARF1Q14162 830 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 SSH1Q8WYL5 1049 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
SP140-202ENST00000373645 MXD3Q9BW11 206 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
SP140-202ENST00000373645 MKI67P46013 3256 aaKnown RBP9.8□□□□□ -0.84
SP140-202ENST00000373645 ZNF646O15015 1829 aaPredicted RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 PSME4Q14997 1843 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 ZNF280AP59817 542 aaPredicted RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 RPS8P62241 208 aaKnown RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 PRPF38BQ5VTL8 546 aaKnown RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 ANKRD13DQ6ZTN6 518 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 ZNF296Q8WUU4 475 aaPredicted RBP9.79□□□□□ -0.84
SP140-202ENST00000373645 GMLQ99445 158 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 STK31Q9BXU1 1019 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 R3HDMLQ9H3Y0 253 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 SMC4Q9NTJ3 1288 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 ZNF609O15014 1411 aa9.79□□□□□ -0.84
SP140-202ENST00000373645 UBE2Q2LH0YL09 131 aa9.78□□□□□ -0.84
SP140-202ENST00000373645 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
SP140-202ENST00000373645 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
SP140-202ENST00000373645 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
SP140-202ENST00000373645 EYA3Q99504 573 aa9.78□□□□□ -0.84
SP140-202ENST00000373645 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
SP140-202ENST00000373645 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
SP140-202ENST00000373645 HTTP42858 3142 aa9.78□□□□□ -0.84
SP140-202ENST00000373645 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
SP140-202ENST00000373645 NBPF9Q3BBW0 867 aa9.77□□□□□ -0.85
SP140-202ENST00000373645 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
SP140-202ENST00000373645 PHAXQ9H814 394 aaKnown RBP9.77□□□□□ -0.85
SP140-202ENST00000373645 MYOZ2Q9NPC6 264 aa9.77□□□□□ -0.85
SP140-202ENST00000373645 DBF4Q9UBU7 674 aaPredicted RBP9.77□□□□□ -0.85
SP140-202ENST00000373645 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
SP140-202ENST00000373645 FZD1Q9UP38 647 aa9.77□□□□□ -0.85
SP140-202ENST00000373645 SPEF2Q9C093 1822 aa9.77□□□□□ -0.85
SP140-202ENST00000373645 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
SP140-202ENST00000373645 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 RRP1P56182 461 aaKnown RBP9.76□□□□□ -0.85
SP140-202ENST00000373645 AGBL3Q8NEM8 1001 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 ARHGAP45Q92619 1136 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
SP140-202ENST00000373645 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 NOB1Q9ULX3 412 aaKnown RBP9.76□□□□□ -0.85
SP140-202ENST00000373645 KIF16BQ96L93 1317 aa9.76□□□□□ -0.85
SP140-202ENST00000373645 KIAA0100Q14667 2235 aaKnown RBP9.75□□□□□ -0.85
SP140-202ENST00000373645 G3V3G9 751 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms