RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 ASIC1P78348 528 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 SDCCAG8Q86SQ7 713 aaPredicted RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ZNF277Q9NRM2 450 aaPredicted RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 PPME1Q9Y570 386 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 SETD1BQ9UPS6 1966 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 INPP1P49441 399 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 NAPAP54920 295 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 PPP1R21Q6ZMI0 780 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC170Q8IYT3 715 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 SEC62Q99442 399 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 SLC26A6Q9BXS9 759 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 CLGNO14967 610 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 LIN9Q5TKA1 542 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ZNF449Q6P9G9 518 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 EYA3Q99504 573 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ERCC3P19447 782 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ANKRD30BQ9BXX2 1392 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 RFC1P35251 1148 aaPredicted RBP10.23□□□□□ -0.77
CSMD2-205ENST00000373381 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 MNAT1P51948 309 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 TOM1O60784 492 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 TMC6Q7Z403 805 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 SAMD15Q9P1V8 674 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 AKNAD1Q5T1N1 836 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 BIRC3Q13489 604 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 SELENOSQ9BQE4 189 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 CAVIN2O95810 425 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 ESR2Q92731 530 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 IL1RAPL2Q9NP60 686 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 BRD4O60885 1362 aaPredicted RBP10.23□□□□□ -0.77
CSMD2-205ENST00000373381 MX1P20591 662 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 SLC12A2P55011 1212 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 PNMA2Q9UL42 364 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
CSMD2-205ENST00000373381 TAF7Q15545 349 aaPredicted RBP10.23□□□□□ -0.77
CSMD2-205ENST00000373381 DNM2P50570 870 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 WTAPQ15007 396 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 F8W031 263 aaPredicted RBP10.22□□□□□ -0.77
CSMD2-205ENST00000373381 DKC1O60832 514 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSMD2-205ENST00000373381 RTEL1Q9NZ71 1219 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 ZNF408Q9H9D4 720 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 MCM5P33992 734 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 EPB41P11171 864 aaKnown RBP10.22□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC62Q6P9F0 684 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 RABGAP1Q9Y3P9 1069 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 MPNDQ8N594 471 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 PHLDB2Q86SQ0 1253 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 HMG20BQ9P0W2 317 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 GJA3Q9Y6H8 435 aa10.22□□□□□ -0.77
CSMD2-205ENST00000373381 FYB2Q5VWT5 728 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 ATP2A3Q93084 1043 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 NLRP3Q96P20 1036 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 SPAG1Q07617 926 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 USP16Q9Y5T5 823 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 GNA11P29992 359 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 SP4Q02446 784 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 CALCOCO2Q13137 446 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 RTN1Q16799 776 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 CLSTN2Q9H4D0 955 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 ITM2BQ9Y287 266 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 MAP3K7O43318 606 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 XPAP23025 273 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-205ENST00000373381 RPS6KA2Q15349 733 aa10.21□□□□□ -0.77
CSMD2-205ENST00000373381 UAP1Q16222 522 aaPredicted RBP10.21□□□□□ -0.77
CSMD2-205ENST00000373381 CTAGE9A4FU28 777 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 P4HA1P13674 534 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 DNAJC21Q5F1R6 531 aaKnown RBP10.21□□□□□ -0.78
CSMD2-205ENST00000373381 RRAGBQ5VZM2 374 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.78
CSMD2-205ENST00000373381 PARD3BQ8TEW8 1205 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 DDX19AQ9NUU7 478 aaKnown RBP10.21□□□□□ -0.78
CSMD2-205ENST00000373381 I3L4J1 428 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 GPTP24298 496 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 TUBB4BP68371 445 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 DUSP27Q5VZP5 1158 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 KCNK9Q9NPC2 374 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 LGSNQ5TDP6 509 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 CACNA2D3Q8IZS8 1091 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 BAG5Q9UL15 447 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 ADAMTS8Q9UP79 889 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 KRT3P12035 628 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 SKA2Q8WVK7 121 aaPredicted RBP10.21□□□□□ -0.78
CSMD2-205ENST00000373381 NKIRAS1Q9NYS0 192 aa10.21□□□□□ -0.78
CSMD2-205ENST00000373381 NAA25Q14CX7 972 aa10.2□□□□□ -0.78
CSMD2-205ENST00000373381 TSR2Q969E8 191 aaKnown RBP10.2□□□□□ -0.78
CSMD2-205ENST00000373381 AZI2Q9H6S1 392 aa10.2□□□□□ -0.78
CSMD2-205ENST00000373381 EXOC7Q9UPT5 735 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms