RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 PSME1Q06323 249 aa11.41□□□□□ -0.58
CSMD2-203ENST00000373377 STK38Q15208 465 aa11.41□□□□□ -0.58
CSMD2-203ENST00000373377 CCAR2Q8N163 923 aaKnown RBP11.41□□□□□ -0.58
CSMD2-203ENST00000373377 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
CSMD2-203ENST00000373377 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
CSMD2-203ENST00000373377 COPS6Q7L5N1 327 aa11.41□□□□□ -0.58
CSMD2-203ENST00000373377 XAGE3Q8WTP9 111 aa11.41□□□□□ -0.58
CSMD2-203ENST00000373377 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
CSMD2-203ENST00000373377 SLU7O95391 586 aaKnown RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 EPC1Q9H2F5 836 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 DNAI1Q9UI46 699 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 SFPQP23246 707 aaKnown RBP eCLIP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 TTLL5Q6EMB2 1281 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 DHX40Q8IX18 779 aaKnown RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
CSMD2-203ENST00000373377 ZNF330Q9Y3S2 320 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-203ENST00000373377 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 TIMM10P62072 90 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 CCZ1BP86790 482 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 KRT32Q14532 448 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 IP6K1Q92551 441 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 HMG20BQ9P0W2 317 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 NDUFA8P51970 172 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 ARHGAP29Q52LW3 1261 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 NAT10Q9H0A0 1025 aaKnown RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 SHANK3Q9BYB0 1731 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 URI1O94763 535 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 TERF2Q15554 542 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 NSUN7Q8NE18 718 aaKnown RBP11.39□□□□□ -0.59
CSMD2-203ENST00000373377 KCNB2Q92953 911 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 PCDHA7Q9UN72 937 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 HDAC5Q9UQL6 1122 aa11.39□□□□□ -0.59
CSMD2-203ENST00000373377 COL15A1P39059 1388 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 RNMTO43148 476 aaKnown RBP11.38□□□□□ -0.59
CSMD2-203ENST00000373377 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSMD2-203ENST00000373377 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 MRFAP1L1Q96HT8 127 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
CSMD2-203ENST00000373377 BABAM1Q9NWV8 329 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 CLIC4Q9Y696 253 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
CSMD2-203ENST00000373377 MTX1Q13505 466 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 TNNI3KQ59H18 835 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 PDILTQ8N807 584 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 ERO1AQ96HE7 468 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 FPGT-TNNI3KV9GXZ4 949 aa11.38□□□□□ -0.59
CSMD2-203ENST00000373377 SERPINC1P01008 464 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 RXRAP19793 462 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 WASHC4Q2M389 1173 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 NRDCO43847 1150 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 ATP1A3P13637 1013 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 AKAP4Q5JQC9 854 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 RBM43Q6ZSC3 357 aaKnown RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 MRPS27Q92552 414 aaKnown RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 MORC2Q9Y6X9 1032 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 MRC1P22897 1456 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 A0A087WZG4 1122 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 CPLX1O14810 134 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 GABPB1Q06547 395 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 CFAP100Q494V2 611 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 DHX32Q7L7V1 743 aaKnown RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
CSMD2-203ENST00000373377 PAPPAQ13219 1627 aa11.37□□□□□ -0.59
CSMD2-203ENST00000373377 CTAGE5O15320 804 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 SEC31AO94979 1220 aaKnown RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 SYNE3Q6ZMZ3 975 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 NEMFO60524 1076 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 SLC3A2P08195 630 aaKnown RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 ADD1P35611 737 aaKnown RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 GCKRQ14397 625 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 NFATC2IPQ8NCF5 419 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 UBXN4Q92575 508 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 CCDC34Q96HJ3 373 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
CSMD2-203ENST00000373377 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
CSMD2-203ENST00000373377 NEURL1BA8MQ27 555 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms