RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
TRAPPC3-203ENST00000373163 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC3-203ENST00000373163 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
TRAPPC3-203ENST00000373163 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
TRAPPC3-203ENST00000373163 FBXW7Q969H0 707 aa20.44■□□□□ 0.86
TRAPPC3-203ENST00000373163 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC3-203ENST00000373163 MYO3BQ8WXR4 1341 aa20.44■□□□□ 0.86
TRAPPC3-203ENST00000373163 HTTP42858 3142 aa20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 IGF2BP3O00425 579 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 SLC10A4Q96EP9 437 aa20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 FZD1Q9UP38 647 aa20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 PSME4Q14997 1843 aa20.43■□□□□ 0.86
TRAPPC3-203ENST00000373163 ZBTB48P10074 688 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC3-203ENST00000373163 TMEM106CQ9BVX2 250 aa20.42■□□□□ 0.86
TRAPPC3-203ENST00000373163 EFCC1Q9HA90 598 aa20.42■□□□□ 0.86
TRAPPC3-203ENST00000373163 HYPKQ9NX55 129 aa20.42■□□□□ 0.86
TRAPPC3-203ENST00000373163 MED23Q9ULK4 1368 aa20.42■□□□□ 0.86
TRAPPC3-203ENST00000373163 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 CHL1O00533 1208 aa20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 PDE8AO60658 829 aa20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 HOXB7P09629 217 aa20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 STRIP1Q5VSL9 837 aa20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 WNK4Q96J92 1243 aa20.41■□□□□ 0.86
TRAPPC3-203ENST00000373163 MMP14P50281 582 aa20.4■□□□□ 0.86
TRAPPC3-203ENST00000373163 CRHR2Q13324 411 aa20.4■□□□□ 0.86
TRAPPC3-203ENST00000373163 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
TRAPPC3-203ENST00000373163 RBBP6Q7Z6E9 1792 aaKnown RBP20.4■□□□□ 0.86
TRAPPC3-203ENST00000373163 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
TRAPPC3-203ENST00000373163 MAP3K11Q16584 847 aa20.39■□□□□ 0.85
TRAPPC3-203ENST00000373163 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
TRAPPC3-203ENST00000373163 COL1A1P02452 1464 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 GOLGA2Q08379 1002 aa20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 OTUD7BQ6GQQ9 843 aa20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 ZNF333Q96JL9 665 aa20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 COA1Q9GZY4 146 aa20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 DEFB129Q9H1M3 183 aa20.38■□□□□ 0.85
TRAPPC3-203ENST00000373163 PPP1R12BO60237 982 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 SP3Q02447 781 aa20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 KIAA0825Q8IV33 1275 aa20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 MYD88Q99836 296 aa20.37■□□□□ 0.85
TRAPPC3-203ENST00000373163 H0YGN5 161 aa20.36■□□□□ 0.85
TRAPPC3-203ENST00000373163 CAP1Q01518 475 aa20.36■□□□□ 0.85
TRAPPC3-203ENST00000373163 ZBED3Q96IU2 234 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC3-203ENST00000373163 MINPP1Q9UNW1 487 aa20.36■□□□□ 0.85
TRAPPC3-203ENST00000373163 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 TTLL5Q6EMB2 1281 aa20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 OTUD5Q96G74 571 aa20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 BSDC1Q9NW68 430 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 BRCA2P51587 3418 aa20.35■□□□□ 0.85
TRAPPC3-203ENST00000373163 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 UNCXA6NJT0 531 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 SLC4A8Q2Y0W8 1093 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 SLC9C1Q4G0N8 1177 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 NBPF11Q86T75 865 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 PPP2R3BQ9Y5P8 575 aa20.34■□□□□ 0.85
TRAPPC3-203ENST00000373163 CENPFP49454 3210 aa20.33■□□□□ 0.85
TRAPPC3-203ENST00000373163 CTSWP56202 376 aa20.33■□□□□ 0.85
TRAPPC3-203ENST00000373163 TXNRD3Q86VQ6 643 aa20.33■□□□□ 0.85
TRAPPC3-203ENST00000373163 PTPN18Q99952 460 aa20.33■□□□□ 0.85
TRAPPC3-203ENST00000373163 GJA5P36382 358 aa20.32■□□□□ 0.84
TRAPPC3-203ENST00000373163 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
TRAPPC3-203ENST00000373163 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-203ENST00000373163 PTCH2Q9Y6C5 1203 aa20.32■□□□□ 0.84
TRAPPC3-203ENST00000373163 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 DLL1O00548 723 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 GTF2IP78347 998 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 ARHGEF6Q15052 776 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 LEMD3Q9Y2U8 911 aa20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC3-203ENST00000373163 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
TRAPPC3-203ENST00000373163 GREM2Q9H772 168 aa20.3■□□□□ 0.84
TRAPPC3-203ENST00000373163 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
TRAPPC3-203ENST00000373163 MYCP01106 439 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-203ENST00000373163 KLRK1P26718 216 aa20.29■□□□□ 0.84
TRAPPC3-203ENST00000373163 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
TRAPPC3-203ENST00000373163 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 NBPF12Q5TAG4 269 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 ANKRD13AQ8IZ07 590 aa20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 MTMR14Q8NCE2 650 aa20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-203ENST00000373163 CLRN2A0PK11 232 aa20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 MYO1BO43795 1136 aa20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 USP2O75604 605 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 SLC17A8Q8NDX2 589 aa20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 OPTNQ96CV9 577 aa20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 PCDHAC2Q9Y5I4 1007 aa20.27■□□□□ 0.84
TRAPPC3-203ENST00000373163 LAMB1P07942 1786 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms