RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 SGSM2O43147 1006 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 FOSBP53539 338 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 CEP120Q8N960 986 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 SSFA2P28290 1259 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 PXDNLA1KZ92 1463 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 FIBPO43427 364 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 FEZ2Q9UHY8 353 aaPredicted RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 RNF113AO15541 343 aaKnown RBP11.67□□□□□ -0.54
KDM4A-201ENST00000372396 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 USP21Q9UK80 565 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 LEKR1Q6ZMV7 388 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 ARGLU1Q9NWB6 273 aaPredicted RBP11.67□□□□□ -0.54
KDM4A-201ENST00000372396 ITGA6P23229 1130 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 SATB1Q01826 763 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 TPTE2Q6XPS3 522 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 HELLSQ9NRZ9 838 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
KDM4A-201ENST00000372396 BAG4O95429 457 aaKnown RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 ATP5JP18859 108 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 RNF41Q9H4P4 317 aaPredicted RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 CASQ1P31415 396 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 MTX1Q13505 466 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 LRCH2Q5VUJ6 765 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 ANKIB1Q9P2G1 1089 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 RASSF8Q8NHQ8 419 aa11.66□□□□□ -0.54
KDM4A-201ENST00000372396 INTS4Q96HW7 963 aaKnown RBP11.66□□□□□ -0.54
KDM4A-201ENST00000372396 ST5P78524 1137 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
KDM4A-201ENST00000372396 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
KDM4A-201ENST00000372396 CCNL1Q9UK58 526 aaPredicted RBP11.65□□□□□ -0.54
KDM4A-201ENST00000372396 ATP10DQ9P241 1426 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 HNRNPH2P55795 449 aaKnown RBP11.65□□□□□ -0.54
KDM4A-201ENST00000372396 PIGBQ92521 554 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 WASF1Q92558 559 aa11.65□□□□□ -0.54
KDM4A-201ENST00000372396 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
KDM4A-201ENST00000372396 BECN2A8MW95 431 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 EP400NLQ6ZTU2 488 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 AKAP12Q02952 1782 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 PSEN1P49768 467 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 NCOA7Q8NI08 942 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 EAF2Q96CJ1 260 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 GPR108Q9NPR9 543 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 TIMM10P62072 90 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 ANKRD20A12PQ8NF67 263 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 GNPATO15228 680 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 SLFN14P0C7P3 912 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 USP8P40818 1118 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 SIK1P57059 783 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 PUM3Q15397 648 aaKnown RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 DZIP1Q86YF9 867 aaKnown RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
KDM4A-201ENST00000372396 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
KDM4A-201ENST00000372396 KRBA2Q6ZNG9 492 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 ZNF594Q96JF6 807 aaPredicted RBP11.63□□□□□ -0.55
KDM4A-201ENST00000372396 XRN1Q8IZH2 1706 aaKnown RBP11.63□□□□□ -0.55
KDM4A-201ENST00000372396 H0YHG0 523 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 POLR3GO15318 223 aaPredicted RBP11.63□□□□□ -0.55
KDM4A-201ENST00000372396 STX6O43752 255 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 CIAO1O76071 339 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 CTSWP56202 376 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 SARNPP82979 210 aaKnown RBP11.63□□□□□ -0.55
KDM4A-201ENST00000372396 STK38Q15208 465 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 GIMAP7Q8NHV1 300 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 XAGE2Q96GT9 111 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 ANKRD2Q9GZV1 360 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 JRKLQ9Y4A0 524 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 MROH5Q6ZUA9 1318 aa11.63□□□□□ -0.55
KDM4A-201ENST00000372396 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
KDM4A-201ENST00000372396 GJB2P29033 226 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms