RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
TMEM53-203ENST00000372242 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
TMEM53-203ENST00000372242 IRS2Q9Y4H2 1338 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 MED23Q9ULK4 1368 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 A0A1B0GUL7 405 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 RAB11FIP3O75154 756 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 LPIN2Q92539 896 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 DBNDD1Q9H9R9 158 aa20.15■□□□□ 0.82
TMEM53-203ENST00000372242 GYG1P46976 350 aa20.14■□□□□ 0.81
TMEM53-203ENST00000372242 KIF1BPQ96EK5 621 aa20.14■□□□□ 0.81
TMEM53-203ENST00000372242 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
TMEM53-203ENST00000372242 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
TMEM53-203ENST00000372242 AKAP2Q9Y2D5 859 aa20.14■□□□□ 0.81
TMEM53-203ENST00000372242 SMARCA5O60264 1052 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-203ENST00000372242 IFIT1P09914 478 aaKnown RBP20.13■□□□□ 0.81
TMEM53-203ENST00000372242 SLC5A1P13866 664 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 JDP2Q8WYK2 163 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 ZNF609O15014 1411 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 G3V3G9 751 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 ADORA1P30542 326 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 TNNI3KQ59H18 835 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 DCAF8Q5TAQ9 597 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 C15orf52Q6ZUT6 534 aaKnown RBP20.13■□□□□ 0.81
TMEM53-203ENST00000372242 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 FPGT-TNNI3KV9GXZ4 949 aa20.13■□□□□ 0.81
TMEM53-203ENST00000372242 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
TMEM53-203ENST00000372242 EAF2Q96CJ1 260 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-203ENST00000372242 FAM84BQ96KN1 310 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-203ENST00000372242 DICER1Q9UPY3 1922 aaKnown RBP20.12■□□□□ 0.81
TMEM53-203ENST00000372242 ECE2O60344 883 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 BCAMP50895 628 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 GPR108Q9NPR9 543 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 XAGE2Q96GT9 111 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 CCDC8Q9H0W5 538 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-203ENST00000372242 KCNQ5Q9NR82 932 aa20.11■□□□□ 0.81
TMEM53-203ENST00000372242 TIAM2Q8IVF5 1701 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 HIBADHP31937 336 aaKnown RBP20.1■□□□□ 0.81
TMEM53-203ENST00000372242 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 ZNF804AQ7Z570 1209 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 AACSQ86V21 672 aa20.1■□□□□ 0.81
TMEM53-203ENST00000372242 TLR7Q9NYK1 1049 aaKnown RBP20.1■□□□□ 0.81
TMEM53-203ENST00000372242 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 VPS37DQ86XT2 251 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 SMC5Q8IY18 1101 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
TMEM53-203ENST00000372242 DBNDD2Q9BQY9 259 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 COA1Q9GZY4 146 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 CD209Q9NNX6 404 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
TMEM53-203ENST00000372242 CHD4Q14839 1912 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 ARAP2Q8WZ64 1704 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 ANKRD45Q5TZF3 282 aa20.09■□□□□ 0.81
TMEM53-203ENST00000372242 FZD9O00144 591 aa20.08■□□□□ 0.8
TMEM53-203ENST00000372242 PHKA1P46020 1223 aa20.08■□□□□ 0.8
TMEM53-203ENST00000372242 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.8
TMEM53-203ENST00000372242 RAD17O75943 681 aa20.07■□□□□ 0.8
TMEM53-203ENST00000372242 GORABQ5T7V8 394 aa20.07■□□□□ 0.8
TMEM53-203ENST00000372242 ZNF541Q9H0D2 1346 aa20.07■□□□□ 0.8
TMEM53-203ENST00000372242 SCN9AQ15858 1988 aa20.07■□□□□ 0.8
TMEM53-203ENST00000372242 CCDC102BQ68D86 513 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 PODNQ7Z5L7 613 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
TMEM53-203ENST00000372242 IL1R1P14778 569 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 CXCL9Q07325 125 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 JAG2Q9Y219 1238 aa20.06■□□□□ 0.8
TMEM53-203ENST00000372242 ERICH6BQ5W0A0 696 aa20.05■□□□□ 0.8
TMEM53-203ENST00000372242 C16orf71Q8IYS4 520 aaPredicted RBP20.05■□□□□ 0.8
TMEM53-203ENST00000372242 TDRD7Q8NHU6 1098 aaKnown RBP20.05■□□□□ 0.8
TMEM53-203ENST00000372242 FRAT2O75474 233 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-203ENST00000372242 EIF6P56537 245 aaKnown RBP20.04■□□□□ 0.8
TMEM53-203ENST00000372242 FBXW7Q969H0 707 aa20.04■□□□□ 0.8
TMEM53-203ENST00000372242 GTF2IP78347 998 aa20.04■□□□□ 0.8
TMEM53-203ENST00000372242 ZBTB47Q9UFB7 747 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-203ENST00000372242 LNPKQ9C0E8 428 aa20.03■□□□□ 0.8
TMEM53-203ENST00000372242 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
TMEM53-203ENST00000372242 PSMD14O00487 310 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 DDNO94850 711 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-203ENST00000372242 NUCB1Q02818 461 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 CCDC158Q5M9N0 1113 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 TTLL5Q6EMB2 1281 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 CIAPIN1Q6FI81 312 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 OTUD7AQ8TE49 926 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-203ENST00000372242 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 GNL3LQ9NVN8 582 aaKnown RBP20.02■□□□□ 0.8
TMEM53-203ENST00000372242 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
TMEM53-203ENST00000372242 ZC3H4Q9UPT8 1303 aaKnown RBP20.02■□□□□ 0.8
TMEM53-203ENST00000372242 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.79
TMEM53-203ENST00000372242 TTC39AQ5SRH9 613 aa20.02■□□□□ 0.79
TMEM53-203ENST00000372242 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
TMEM53-203ENST00000372242 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
TMEM53-203ENST00000372242 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
TMEM53-203ENST00000372242 SCARF1Q14162 830 aa20.01■□□□□ 0.79
TMEM53-203ENST00000372242 PI16Q6UXB8 463 aa20.01■□□□□ 0.79
TMEM53-203ENST00000372242 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms