RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 EYA3Q99504 573 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 MAP3K7CLP57077 242 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 ATP11AP98196 1134 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 OGFRQ9NZT2 677 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 ZC3H12CQ9C0D7 883 aaKnown RBP16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 EHMT1Q9H9B1 1298 aa16.02■□□□□ 0.16
RAPGEF1-202ENST00000372190 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.15
RAPGEF1-202ENST00000372190 SNRKQ9NRH2 765 aa16.02■□□□□ 0.15
RAPGEF1-202ENST00000372190 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 BUB1BO60566 1050 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 APBB1IPQ7Z5R6 666 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 CKAP4Q07065 602 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 PPP1R14CQ8TAE6 165 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 DDX27Q96GQ7 796 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 TSNAXIP1Q2TAA8 658 aa16.01■□□□□ 0.15
RAPGEF1-202ENST00000372190 STMN4Q9H169 189 aaPredicted RBP16■□□□□ 0.15
RAPGEF1-202ENST00000372190 PDE4BQ07343 736 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
RAPGEF1-202ENST00000372190 ALS2CR12Q96Q35 445 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 TTC36A6NLP5 189 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 CASTP20810 708 aaKnown RBP16■□□□□ 0.15
RAPGEF1-202ENST00000372190 KSR2Q6VAB6 950 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 STMN2Q93045 179 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 RIMBP2O15034 1052 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 ZNF772Q68DY9 489 aaPredicted RBP16■□□□□ 0.15
RAPGEF1-202ENST00000372190 SPATS2LQ9NUQ6 558 aaKnown RBP16■□□□□ 0.15
RAPGEF1-202ENST00000372190 A0A1W2PRG0 241 aa16■□□□□ 0.15
RAPGEF1-202ENST00000372190 GBP1P32455 592 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 PPP1R12CQ9BZL4 782 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 VEZTQ9HBM0 779 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 TMEM94Q12767 1356 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 MAP7Q14244 749 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 QTRT2Q9H974 415 aaKnown RBP15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 CHMP2AO43633 222 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 CCDC183Q5T5S1 534 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 PPP4R3AQ6IN85 833 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 KRBA2Q6ZNG9 492 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 TRMT1Q9NXH9 659 aaKnown RBP15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 CCDC196A0A1B0GTZ2 297 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
RAPGEF1-202ENST00000372190 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 PRR16Q569H4 304 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 VPS36Q86VN1 386 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 TSNARE1Q96NA8 513 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 B4GALNT4Q76KP1 1039 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 IFT74Q96LB3 600 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 IQSEC3Q9UPP2 1182 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 TRIM27P14373 513 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 ATP2B3Q16720 1220 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 ANO10Q9NW15 660 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 IKBKGQ9Y6K9 419 aa15.98■□□□□ 0.15
RAPGEF1-202ENST00000372190 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 PPFIA2O75334 1257 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 CAMK4Q16566 473 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 ANKRD2Q9GZV1 360 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 TSPY2A6NKD2 308 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 PICALMQ13492 652 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 GRM8O00222 908 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 RXRBP28702 533 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 ECHDC1Q9NTX5 307 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
RAPGEF1-202ENST00000372190 PFDN1O60925 122 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 ZBTB16Q05516 673 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 PLEKHH1Q9ULM0 1364 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 HMGB1P1B2RPK0 211 aaPredicted RBP15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 CCDC38Q502W7 563 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 CCDC87Q9NVE4 849 aa15.96■□□□□ 0.15
RAPGEF1-202ENST00000372190 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms