RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 LPIN2Q92539 896 aa13.28□□□□□ -0.28
LCN1-202ENST00000371781 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
LCN1-202ENST00000371781 AKAP2Q9Y2D5 859 aa13.28□□□□□ -0.28
LCN1-202ENST00000371781 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
LCN1-202ENST00000371781 ZNF646O15015 1829 aaPredicted RBP13.27□□□□□ -0.28
LCN1-202ENST00000371781 MYH7P12883 1935 aa13.27□□□□□ -0.28
LCN1-202ENST00000371781 ERC2O15083 957 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 CHMLP26374 656 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.29
LCN1-202ENST00000371781 MCAMP43121 646 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 GPSM2P81274 684 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.27□□□□□ -0.29
LCN1-202ENST00000371781 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.29
LCN1-202ENST00000371781 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 ANTXR1Q9H6X2 564 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 MYH13Q9UKX3 1938 aa13.27□□□□□ -0.29
LCN1-202ENST00000371781 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 GRIN3BO60391 1043 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 SLC5A1P13866 664 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 NPR1P16066 1061 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 C2CD5Q86YS7 1000 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
LCN1-202ENST00000371781 RFX7Q2KHR2 1363 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
LCN1-202ENST00000371781 PDE6BP35913 854 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 ZAP70P43403 619 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 GYG1P46976 350 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 BCAMP50895 628 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 ZNF512BQ96KM6 892 aaPredicted RBP13.25□□□□□ -0.29
LCN1-202ENST00000371781 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
LCN1-202ENST00000371781 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
LCN1-202ENST00000371781 RBM19Q9Y4C8 960 aaKnown RBP13.25□□□□□ -0.29
LCN1-202ENST00000371781 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 IFIT1P09914 478 aaKnown RBP13.24□□□□□ -0.29
LCN1-202ENST00000371781 KCNA3P22001 575 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 HMG20BQ9P0W2 317 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 MAST2Q6P0Q8 1798 aa13.24□□□□□ -0.29
LCN1-202ENST00000371781 XDHP47989 1333 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 GOLIM4O00461 696 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
LCN1-202ENST00000371781 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
LCN1-202ENST00000371781 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
LCN1-202ENST00000371781 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
LCN1-202ENST00000371781 BBOX1O75936 387 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
LCN1-202ENST00000371781 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
LCN1-202ENST00000371781 CCDC158Q5M9N0 1113 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 PRPF40BQ6NWY9 871 aaKnown RBP13.22□□□□□ -0.29
LCN1-202ENST00000371781 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 PODXL2Q9NZ53 605 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 WWC3Q9ULE0 1092 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
LCN1-202ENST00000371781 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
LCN1-202ENST00000371781 COL4A5P29400 1685 aa13.21□□□□□ -0.29
LCN1-202ENST00000371781 DPEP1P16444 411 aa13.21□□□□□ -0.29
LCN1-202ENST00000371781 C15orf52Q6ZUT6 534 aaKnown RBP13.21□□□□□ -0.29
LCN1-202ENST00000371781 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
LCN1-202ENST00000371781 TBC1D16Q8TBP0 767 aa13.21□□□□□ -0.29
LCN1-202ENST00000371781 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
LCN1-202ENST00000371781 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
LCN1-202ENST00000371781 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
LCN1-202ENST00000371781 H0YIN7 160 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 SGSM2O43147 1006 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 UFL1O94874 794 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
LCN1-202ENST00000371781 SEC62Q99442 399 aaKnown RBP13.2□□□□□ -0.3
LCN1-202ENST00000371781 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
LCN1-202ENST00000371781 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
LCN1-202ENST00000371781 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 ZBTB22O15209 634 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 ATP2B4P23634 1241 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
LCN1-202ENST00000371781 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
LCN1-202ENST00000371781 KCNJ4P48050 445 aa13.18□□□□□ -0.3
LCN1-202ENST00000371781 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms