RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 ADGRB3O60242 1522 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 ZFYVE16Q7Z3T8 1539 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 EXOC5O00471 708 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 TPM1P09493 284 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 ME1P48163 572 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 CCDC73Q6ZRK6 1079 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 GOLGA1Q92805 767 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 ABCC1P33527 1531 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 NEDD4P46934 1319 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 MROH1Q8NDA8 1641 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 CPP00450 1065 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 ADKP55263 362 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 VSNL1P62760 191 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 FLIIQ13045 1269 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 DNAAF4Q8WXU2 420 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 GDAP1L1Q96MZ0 367 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 TM6SF1Q9BZW5 370 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 MRPL44Q9H9J2 332 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 L1RE1Q9UN81 338 aa10.89□□□□□ -0.67
HMGCLL1-204ENST00000370852 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 FAM160A1Q05DH4 1040 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 CCDC12Q8WUD4 166 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 KCNB2Q92953 911 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 ZFYVE9O95405 1425 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 EPB41L2O43491 1005 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 PSME1Q06323 249 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 MTX1Q13505 466 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 FMR1NBQ8N0W7 255 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 INTS13Q9NVM9 706 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 RCOR1Q9UKL0 485 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 PCDHA7Q9UN72 937 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 AOX1Q06278 1338 aa10.88□□□□□ -0.67
HMGCLL1-204ENST00000370852 ABL1P00519 1130 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 NBPF7P0C2Y1 421 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 ZKSCAN1P17029 563 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 TDO2P48775 406 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 CHMP4BP1P59074 171 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 CASP8Q14790 479 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 OTUD7BQ6GQQ9 843 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 HDXQ7Z353 690 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 EFCAB13Q8IY85 973 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 PDILTQ8N807 584 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 FANCLQ9NW38 375 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 RAI14Q9P0K7 980 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 CTAGE5O15320 804 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 ERLIN2O94905 339 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 UBTFL1P0CB47 393 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 KCNJ6P48051 423 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 CCT5P48643 541 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 UBASH3AP57075 661 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 TTC19Q6DKK2 380 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 ZNF589Q86UQ0 364 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 CEP89Q96ST8 783 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 LZTFL1Q9NQ48 299 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 KIF20BQ96Q89 1820 aa10.87□□□□□ -0.67
HMGCLL1-204ENST00000370852 A0A087WUV0 522 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 PPFIA4O75335 1185 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 HSP90B1P14625 803 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 ATP2B2Q01814 1243 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 SCRN1Q12765 414 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 CFAP100Q494V2 611 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 MAP4K1Q92918 833 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 EDC3Q96F86 508 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 MPHOSPH8Q99549 860 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 HINFPQ9BQA5 517 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 CFAP45Q9UL16 551 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 PA2G4Q9UQ80 394 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 ATP7BP35670 1465 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 NPHP4O75161 1426 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 ADGRL3Q9HAR2 1447 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 CUTAO60888 179 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 RNF40O75150 1001 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 SYF2O95926 243 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 IDI1Q13907 227 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 BRD3Q15059 726 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 JAKMIP3Q5VZ66 844 aa10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-204ENST00000370852 NCOA5Q9HCD5 579 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms