RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KRT26Q7Z3Y9 468 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
SS18L1-202ENST00000370848 RARSP54136 660 aaKnown RBP19.21■□□□□ 0.67
SS18L1-202ENST00000370848 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
SS18L1-202ENST00000370848 BEGAINQ9BUH8 593 aa19.21■□□□□ 0.67
SS18L1-202ENST00000370848 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
SS18L1-202ENST00000370848 A0A1B0GUL6 1792 aa19.2■□□□□ 0.66
SS18L1-202ENST00000370848 FAM155AB1AL88 458 aaPredicted RBP19.2■□□□□ 0.66
SS18L1-202ENST00000370848 DCPSQ96C86 337 aaKnown RBP19.2■□□□□ 0.66
SS18L1-202ENST00000370848 GREM2Q9H772 168 aa19.2■□□□□ 0.66
SS18L1-202ENST00000370848 PTPRCP08575 1304 aa19.2■□□□□ 0.66
SS18L1-202ENST00000370848 PAPPA2Q9BXP8 1791 aa19.19■□□□□ 0.66
SS18L1-202ENST00000370848 CSF1RP07333 972 aa19.19■□□□□ 0.66
SS18L1-202ENST00000370848 MMP14P50281 582 aa19.19■□□□□ 0.66
SS18L1-202ENST00000370848 HUNKP57058 714 aa19.19■□□□□ 0.66
SS18L1-202ENST00000370848 GBA2Q9HCG7 927 aaPredicted RBP19.19■□□□□ 0.66
SS18L1-202ENST00000370848 GGA3Q9NZ52 723 aa19.19■□□□□ 0.66
SS18L1-202ENST00000370848 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
SS18L1-202ENST00000370848 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 ADM5C9JUS6 153 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 ABHD8Q96I13 439 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 ZNF408Q9H9D4 720 aa19.18■□□□□ 0.66
SS18L1-202ENST00000370848 CCT4P50991 539 aaKnown RBP19.17■□□□□ 0.66
SS18L1-202ENST00000370848 RGMBQ6NW40 437 aa19.17■□□□□ 0.66
SS18L1-202ENST00000370848 DLK2Q6UY11 383 aa19.17■□□□□ 0.66
SS18L1-202ENST00000370848 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
SS18L1-202ENST00000370848 LEMD3Q9Y2U8 911 aa19.17■□□□□ 0.66
SS18L1-202ENST00000370848 BCAR3O75815 825 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 ALDH1L1O75891 902 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 USP17L8P0C7I0 530 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 FKBP1BP68106 108 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 DACT2Q5SW24 774 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 SULF1Q8IWU6 871 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 C2orf69Q8N8R5 385 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 MYOZ2Q9NPC6 264 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 SAGE1Q9NXZ1 904 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 ASTN2O75129 1339 aaPredicted RBP19.16■□□□□ 0.66
SS18L1-202ENST00000370848 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
SS18L1-202ENST00000370848 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
SS18L1-202ENST00000370848 GRM8O00222 908 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 GRM1Q13255 1194 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 STRIP1Q5VSL9 837 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 ZIC5Q96T25 663 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 COA1Q9GZY4 146 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 TNNQ9UQP3 1299 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 IRS2Q9Y4H2 1338 aa19.15■□□□□ 0.66
SS18L1-202ENST00000370848 G3V3G9 751 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 SLC10A3P09131 477 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 SCARF1Q14162 830 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 EPHA10Q5JZY3 1008 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 DCAF8Q5TAQ9 597 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 CDCA5Q96FF9 252 aa19.14■□□□□ 0.65
SS18L1-202ENST00000370848 ITGA6P23229 1130 aa19.13■□□□□ 0.65
SS18L1-202ENST00000370848 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
SS18L1-202ENST00000370848 RBM26Q5T8P6 1007 aaKnown RBP19.13■□□□□ 0.65
SS18L1-202ENST00000370848 ANGEL2Q5VTE6 544 aaKnown RBP19.13■□□□□ 0.65
SS18L1-202ENST00000370848 C15orf52Q6ZUT6 534 aaKnown RBP19.13■□□□□ 0.65
SS18L1-202ENST00000370848 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
SS18L1-202ENST00000370848 NBPF7P0C2Y1 421 aaPredicted RBP19.12■□□□□ 0.65
SS18L1-202ENST00000370848 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
SS18L1-202ENST00000370848 FOXO4P98177 505 aa19.12■□□□□ 0.65
SS18L1-202ENST00000370848 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
SS18L1-202ENST00000370848 SUCLG2Q96I99 432 aa19.12■□□□□ 0.65
SS18L1-202ENST00000370848 C9orf78Q9NZ63 289 aaPredicted RBP19.12■□□□□ 0.65
SS18L1-202ENST00000370848 ZNF804BA4D1E1 1349 aa19.11■□□□□ 0.65
SS18L1-202ENST00000370848 RGS19P49795 217 aa19.11■□□□□ 0.65
SS18L1-202ENST00000370848 REM2Q8IYK8 340 aaPredicted RBP19.11■□□□□ 0.65
SS18L1-202ENST00000370848 CASP8AP2Q9UKL3 1982 aa19.11■□□□□ 0.65
SS18L1-202ENST00000370848 LAMB1P07942 1786 aa19.11■□□□□ 0.65
SS18L1-202ENST00000370848 AKAP11Q9UKA4 1901 aa19.1■□□□□ 0.65
SS18L1-202ENST00000370848 KIF16BQ96L93 1317 aa19.1■□□□□ 0.65
SS18L1-202ENST00000370848 FRAT1Q92837 279 aaPredicted RBP19.1■□□□□ 0.65
SS18L1-202ENST00000370848 KAZALD1Q96I82 304 aa19.1■□□□□ 0.65
SS18L1-202ENST00000370848 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
SS18L1-202ENST00000370848 API5Q9BZZ5 524 aaKnown RBP19.1■□□□□ 0.65
SS18L1-202ENST00000370848 TSKSQ9UJT2 592 aa19.1■□□□□ 0.65
SS18L1-202ENST00000370848 COL1A1P02452 1464 aaPredicted RBP19.09■□□□□ 0.65
SS18L1-202ENST00000370848 ECM29Q5VYK3 1845 aa19.09■□□□□ 0.65
SS18L1-202ENST00000370848 UTYO14607 1347 aa19.09■□□□□ 0.65
SS18L1-202ENST00000370848 WNT10BO00744 389 aa19.09■□□□□ 0.65
SS18L1-202ENST00000370848 ZNF157P51786 506 aaPredicted RBP19.09■□□□□ 0.65
SS18L1-202ENST00000370848 TRIM27P14373 513 aa19.08■□□□□ 0.64
SS18L1-202ENST00000370848 KIF23Q02241 960 aaPredicted RBP19.08■□□□□ 0.64
SS18L1-202ENST00000370848 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
SS18L1-202ENST00000370848 RASAL3Q86YV0 1011 aa19.08■□□□□ 0.64
SS18L1-202ENST00000370848 USP44Q9H0E7 712 aa19.08■□□□□ 0.64
SS18L1-202ENST00000370848 CHMP3Q9Y3E7 222 aa19.08■□□□□ 0.64
SS18L1-202ENST00000370848 KLRK1P26718 216 aa19.07■□□□□ 0.64
SS18L1-202ENST00000370848 CHRNDQ07001 517 aa19.07■□□□□ 0.64
SS18L1-202ENST00000370848 NBPF9Q3BBW0 867 aa19.07■□□□□ 0.64
SS18L1-202ENST00000370848 OGFOD1Q8N543 542 aa19.07■□□□□ 0.64
SS18L1-202ENST00000370848 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
SS18L1-202ENST00000370848 MTMR14Q8NCE2 650 aa19.06■□□□□ 0.64
SS18L1-202ENST00000370848 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
SS18L1-202ENST00000370848 CLUAP1Q96AJ1 413 aa19.06■□□□□ 0.64
SS18L1-202ENST00000370848 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms