RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 A1BGP04217 495 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 HSPD1P10809 573 aaKnown RBP17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 CASP7P55210 303 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 FOXO4P98177 505 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 PRDM4Q9UKN5 801 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 BECN2A8MW95 431 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 M0R2C6 588 aa17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
ARFGAP1-202ENST00000370275 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 CCDC73Q6ZRK6 1079 aa17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 MRC1P22897 1456 aa17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 MAST3O60307 1309 aa17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 PDIA4P13667 645 aaKnown RBP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 V9GYY5 206 aaPredicted RBP17.03■□□□□ 0.32
ARFGAP1-202ENST00000370275 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 IFIT1P09914 478 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 PDIA3P30101 505 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 SLIT3O75094 1523 aa17.02■□□□□ 0.32
ARFGAP1-202ENST00000370275 RCOR1Q9UKL0 485 aa17.02■□□□□ 0.31
ARFGAP1-202ENST00000370275 BIN1O00499 593 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 STX1AQ16623 288 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-202ENST00000370275 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
ARFGAP1-202ENST00000370275 ADORA1P30542 326 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
ARFGAP1-202ENST00000370275 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
ARFGAP1-202ENST00000370275 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 DCAF5Q96JK2 942 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 PCDHA7Q9UN72 937 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
ARFGAP1-202ENST00000370275 SDF4Q9BRK5 362 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 CLIC4Q9Y696 253 aa17■□□□□ 0.31
ARFGAP1-202ENST00000370275 SKILP12757 684 aa16.99■□□□□ 0.31
ARFGAP1-202ENST00000370275 CTIFO43310 598 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 LLPHQ9BRT6 129 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 SCN11AQ9UI33 1791 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 ZSCAN20P17040 1043 aaPredicted RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 NDUFA8P51970 172 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 FAM160A1Q05DH4 1040 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 ENGASEQ8NFI3 743 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 H7C1W4 665 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 SCARF1Q14162 830 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 CCDC112Q8NEF3 446 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 DSCC1Q9BVC3 393 aa16.98■□□□□ 0.31
ARFGAP1-202ENST00000370275 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 NPHP1O15259 732 aa16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 CEP135Q66GS9 1140 aa16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 RXRAP19793 462 aa16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
ARFGAP1-202ENST00000370275 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 EYA2O00167 538 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 STK38Q15208 465 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 PTPN21Q16825 1174 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 AIFM3Q96NN9 605 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
ARFGAP1-202ENST00000370275 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 GOLGA8BA8MQT2 603 aa16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 FOXP2O15409 715 aa16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 MRPS27Q92552 414 aaKnown RBP16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 ANO10Q9NW15 660 aa16.95■□□□□ 0.3
ARFGAP1-202ENST00000370275 CEP57L1Q8IYX8 460 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms