RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 COA1Q9GZY4 146 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 GPBP1L1Q9HC44 474 aaPredicted RBP17.03■□□□□ 0.32
SSR4-202ENST00000370085 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
SSR4-202ENST00000370085 GPC2Q8N158 579 aa17.02■□□□□ 0.32
SSR4-202ENST00000370085 LPIN2Q92539 896 aa17.02■□□□□ 0.32
SSR4-202ENST00000370085 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.32
SSR4-202ENST00000370085 DBNDD1Q9H9R9 158 aa17.02■□□□□ 0.32
SSR4-202ENST00000370085 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
SSR4-202ENST00000370085 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
SSR4-202ENST00000370085 ATP2B3Q16720 1220 aa17■□□□□ 0.31
SSR4-202ENST00000370085 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
SSR4-202ENST00000370085 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
SSR4-202ENST00000370085 GJA3Q9Y6H8 435 aa17■□□□□ 0.31
SSR4-202ENST00000370085 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
SSR4-202ENST00000370085 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
SSR4-202ENST00000370085 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
SSR4-202ENST00000370085 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
SSR4-202ENST00000370085 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
SSR4-202ENST00000370085 RAD17O75943 681 aa16.98■□□□□ 0.31
SSR4-202ENST00000370085 LMOD1P29536 600 aaPredicted RBP16.98■□□□□ 0.31
SSR4-202ENST00000370085 CXCL9Q07325 125 aa16.98■□□□□ 0.31
SSR4-202ENST00000370085 TFCP2Q12800 502 aa16.98■□□□□ 0.31
SSR4-202ENST00000370085 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
SSR4-202ENST00000370085 COL4A5P29400 1685 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
SSR4-202ENST00000370085 SNAP23O00161 211 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
SSR4-202ENST00000370085 FGFR2P21802 821 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
SSR4-202ENST00000370085 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 GPR108Q9NPR9 543 aa16.97■□□□□ 0.31
SSR4-202ENST00000370085 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
SSR4-202ENST00000370085 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
SSR4-202ENST00000370085 KLRK1P26718 216 aa16.96■□□□□ 0.31
SSR4-202ENST00000370085 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
SSR4-202ENST00000370085 FBXW7Q969H0 707 aa16.96■□□□□ 0.31
SSR4-202ENST00000370085 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
SSR4-202ENST00000370085 EXOC6BQ9Y2D4 811 aa16.96■□□□□ 0.31
SSR4-202ENST00000370085 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.3
SSR4-202ENST00000370085 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 PSMD14O00487 310 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 IL1R1P14778 569 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 GYG1P46976 350 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 FAM84BQ96KN1 310 aaPredicted RBP16.95■□□□□ 0.3
SSR4-202ENST00000370085 NEUROD6Q96NK8 337 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 SCN4AP35499 1836 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
SSR4-202ENST00000370085 PSME4Q14997 1843 aa16.94■□□□□ 0.3
SSR4-202ENST00000370085 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
SSR4-202ENST00000370085 FBXO33Q7Z6M2 555 aa16.94■□□□□ 0.3
SSR4-202ENST00000370085 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
SSR4-202ENST00000370085 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
SSR4-202ENST00000370085 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
SSR4-202ENST00000370085 SASH1O94885 1247 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 MMP14P50281 582 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 GTF2IP78347 998 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
SSR4-202ENST00000370085 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
SSR4-202ENST00000370085 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 DPF2Q92785 391 aa16.93■□□□□ 0.3
SSR4-202ENST00000370085 SCN9AQ15858 1988 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 H7C1D1 291 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 SEMA3EO15041 775 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 NEFLP07196 543 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
SSR4-202ENST00000370085 BCAMP50895 628 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 TIMM10P62072 90 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
SSR4-202ENST00000370085 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
SSR4-202ENST00000370085 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 ZNF609O15014 1411 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
SSR4-202ENST00000370085 APBB1O00213 710 aa16.91■□□□□ 0.3
SSR4-202ENST00000370085 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
SSR4-202ENST00000370085 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
SSR4-202ENST00000370085 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
SSR4-202ENST00000370085 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
SSR4-202ENST00000370085 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
SSR4-202ENST00000370085 FKBP1AP62942 108 aaKnown RBP16.9■□□□□ 0.3
SSR4-202ENST00000370085 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
SSR4-202ENST00000370085 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms