RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
HIPK1-206ENST00000369559 GOLGA5Q8TBA6 731 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
HIPK1-206ENST00000369559 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 PSME1Q06323 249 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 TAF5LO75529 589 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 FOSBP53539 338 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 FBXO18Q8NFZ0 1043 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 PSD3Q9NYI0 1048 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 TRIM66O15016 1216 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
HIPK1-206ENST00000369559 EAF2Q96CJ1 260 aaPredicted RBP11.66□□□□□ -0.54
HIPK1-206ENST00000369559 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 CHPF2Q9P2E5 772 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 TECPR2O15040 1411 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 SLC26A8Q96RN1 970 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
HIPK1-206ENST00000369559 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
HIPK1-206ENST00000369559 ABCC6O95255 1503 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 PFKFB2O60825 505 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 CASQ1P31415 396 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 SRLQ86TD4 932 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 PCDHA7Q9UN72 937 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 A0A1B0GVL5 298 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
HIPK1-206ENST00000369559 NCAPHQ15003 741 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 ADALQ6DHV7 355 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
HIPK1-206ENST00000369559 ADAM21Q9UKJ8 722 aa11.65□□□□□ -0.54
HIPK1-206ENST00000369559 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.55
HIPK1-206ENST00000369559 PLEKHG3A1L390 1219 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 ZSCAN12O43309 604 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 SASH1O94885 1247 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 AMPHP49418 695 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 NDUFA8P51970 172 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 FANCCQ00597 558 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 FUT8Q9BYC5 575 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 TMX1Q9H3N1 280 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 PTPDC1A2A3K4 754 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 NLRP12P59046 1061 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 TLR7Q9NYK1 1049 aaKnown RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 LMAN1P49257 510 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 CTR9Q6PD62 1173 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 ILDR1Q86SU0 546 aaPredicted RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 SIL1Q9H173 461 aa11.64□□□□□ -0.55
HIPK1-206ENST00000369559 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
HIPK1-206ENST00000369559 ZNF142P52746 1687 aaPredicted RBP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 CTDNEP1O95476 244 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 GYS2P54840 703 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 G3BP1Q13283 466 aaKnown RBP eCLIP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 RSRC2Q7L4I2 434 aaKnown RBP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 LRRC2Q9BYS8 371 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 NEDD4P46934 1319 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 SLIT1O75093 1534 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 ACTN2P35609 894 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 PARD6BQ9BYG5 372 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 COL15A1P39059 1388 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 BIN1O00499 593 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 IKBKBO14920 756 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 SLC3A2P08195 630 aaKnown RBP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 HOXB7P09629 217 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 RABGGTAQ92696 567 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
HIPK1-206ENST00000369559 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
HIPK1-206ENST00000369559 CYP21A2P08686 494 aa11.62□□□□□ -0.55
HIPK1-206ENST00000369559 FAM177A1Q8N128 213 aaPredicted RBP11.62□□□□□ -0.55
HIPK1-206ENST00000369559 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
HIPK1-206ENST00000369559 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
HIPK1-206ENST00000369559 ANXA1P04083 346 aa11.62□□□□□ -0.55
HIPK1-206ENST00000369559 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms