RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 DAAM1Q9Y4D1 1078 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 COMMD10Q9Y6G5 202 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 ZNF213O14771 459 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 CA8P35219 290 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 RASSF2P50749 326 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 TTC19Q6DKK2 380 aaPredicted RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 RNF10Q8N5U6 811 aaKnown RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 EXOC4Q96A65 974 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 TNRQ92752 1358 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 TNNI2P48788 182 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 CCDC155Q8N6L0 562 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 N4BP2L2Q92802 583 aaPredicted RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 STMN2Q93045 179 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 EYA3Q99504 573 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 CAMSAP2Q08AD1 1489 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 BRD3Q15059 726 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 ZNF804AQ7Z570 1209 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
SIM1-202ENST00000369208 STMN1P16949 149 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 CCDC110Q8TBZ0 833 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 HOOK2Q96ED9 719 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
SIM1-202ENST00000369208 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
SIM1-202ENST00000369208 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.59
SIM1-202ENST00000369208 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.59
SIM1-202ENST00000369208 PLCG2P16885 1265 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 SDCCAG8Q86SQ7 713 aaPredicted RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 MAP3K7CLP57077 242 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 MX1P20591 662 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 CPLX4Q7Z7G2 160 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 CETN3O15182 167 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 SETDB1Q15047 1291 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 CHD1LQ86WJ1 897 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 CCHCR1Q8TD31 782 aa11.39□□□□□ -0.59
SIM1-202ENST00000369208 SH2B1Q9NRF2 756 aaPredicted RBP11.39□□□□□ -0.59
SIM1-202ENST00000369208 PTPRCP08575 1304 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 CTNNA2P26232 953 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 GMNNO75496 209 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 SPECC1Q5M775 1068 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 ZMYM3Q14202 1370 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
SIM1-202ENST00000369208 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 NAIPQ13075 1403 aa11.38□□□□□ -0.59
SIM1-202ENST00000369208 SREK1Q8WXA9 508 aaKnown RBP11.37□□□□□ -0.59
SIM1-202ENST00000369208 CXorf56Q9H5V9 222 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 CASQ2O14958 399 aaPredicted RBP11.37□□□□□ -0.59
SIM1-202ENST00000369208 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
SIM1-202ENST00000369208 TSNARE1Q96NA8 513 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 GNG11P61952 73 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 MTUS1Q9ULD2 1270 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 OAS2P29728 719 aaKnown RBP11.37□□□□□ -0.59
SIM1-202ENST00000369208 ACTN2P35609 894 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 DDB1Q16531 1140 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 FAM71BQ8TC56 605 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 PEX19P40855 299 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 TSC22D3Q99576 134 aa11.37□□□□□ -0.59
SIM1-202ENST00000369208 GNAQP50148 359 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 SYCP3Q8IZU3 236 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 NCOA1Q15788 1441 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 FANCAO15360 1455 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 ALDH3A1P30838 453 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
SIM1-202ENST00000369208 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 TIAM1Q13009 1591 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 MAATS1Q7Z4T9 603 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms