RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 MIEF2Q96C03 454 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
PRDM1-201ENST00000369089 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 PAX7P23759 505 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 UBASH3AP57075 661 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
PRDM1-201ENST00000369089 ACTN3Q08043 901 aaPredicted RBP11.83□□□□□ -0.52
PRDM1-201ENST00000369089 PPP1R7Q15435 360 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
PRDM1-201ENST00000369089 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 TPP2P29144 1249 aaPredicted RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 PSMD7P51665 324 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 TRIM68Q6AZZ1 485 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 NAA15Q9BXJ9 866 aaKnown RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 FAM114A2Q9NRY5 505 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 RNF40O75150 1001 aa11.82□□□□□ -0.52
PRDM1-201ENST00000369089 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
PRDM1-201ENST00000369089 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CPLX2Q6PUV4 134 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CWC27Q6UX04 472 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 SAMD15Q9P1V8 674 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 ZFXP17010 805 aaPredicted RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CFAP58Q5T655 872 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 PLCH2O75038 1416 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CPLX1O14810 134 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 PPFIA2O75334 1257 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 ZC3H6P61129 1189 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 TMEM57Q8N5G2 664 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 RTEL1-TNFRSF6BF6WH68 1400 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 HIP1RO75146 1068 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 PSMC4P43686 418 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 DNM1Q05193 864 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 CCHCR1Q8TD31 782 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 KLC4Q9NSK0 619 aa11.81□□□□□ -0.52
PRDM1-201ENST00000369089 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
PRDM1-201ENST00000369089 NPHP3Q7Z494 1330 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 NBPF7P0C2Y1 421 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 GOLGA8KD6RF30 607 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 CA8P35219 290 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 MYLK4Q86YV6 388 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 IFNKQ9P0W0 207 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 SAMM50Q9Y512 469 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 CNTROBQ8N137 903 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 BRD1O95696 1058 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 GJB2P29033 226 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 SCRN1Q12765 414 aa11.8□□□□□ -0.52
PRDM1-201ENST00000369089 CACTINQ8WUQ7 758 aaKnown RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 ABTB1Q969K4 478 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 LUC7LQ9NQ29 371 aaKnown RBP11.8□□□□□ -0.52
PRDM1-201ENST00000369089 ATF3P18847 181 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 RNF10Q8N5U6 811 aaKnown RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 WDR62O43379 1518 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 BIN2Q9UBW5 565 aaPredicted RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 PHLPP2Q6ZVD8 1323 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 E7EVH7 732 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
PRDM1-201ENST00000369089 AP1G2O75843 785 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 IFT88Q13099 833 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
PRDM1-201ENST00000369089 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
PRDM1-201ENST00000369089 CLTAP09496 248 aa11.78□□□□□ -0.52
PRDM1-201ENST00000369089 EVA1CP58658 441 aa11.78□□□□□ -0.52
PRDM1-201ENST00000369089 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms