RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
SCNM1-202ENST00000368905 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
SCNM1-202ENST00000368905 SUN2Q9UH99 717 aa11.79□□□□□ -0.52
SCNM1-202ENST00000368905 CCT2P78371 535 aaKnown RBP11.78□□□□□ -0.52
SCNM1-202ENST00000368905 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
SCNM1-202ENST00000368905 RELL1Q8IUW5 271 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 IER2Q9BTL4 223 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
SCNM1-202ENST00000368905 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 SSH2Q76I76 1423 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
SCNM1-202ENST00000368905 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.52
SCNM1-202ENST00000368905 TBX3O15119 743 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 CTAGE5O15320 804 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 NBPF7P0C2Y1 421 aaPredicted RBP11.77□□□□□ -0.52
SCNM1-202ENST00000368905 WDR75Q8IWA0 830 aaKnown RBP11.77□□□□□ -0.52
SCNM1-202ENST00000368905 APBA2Q99767 749 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 OSBPL2Q9H1P3 480 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 CHST12Q9NRB3 414 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 MBIPQ9NS73 344 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.52
SCNM1-202ENST00000368905 XRN1Q8IZH2 1706 aaKnown RBP11.77□□□□□ -0.53
SCNM1-202ENST00000368905 SOWAHDA6NJG2 315 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 TRAPPC10P48553 1259 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 BECN1Q14457 450 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 BRD3Q15059 726 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
SCNM1-202ENST00000368905 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
SCNM1-202ENST00000368905 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
SCNM1-202ENST00000368905 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 FRS2Q8WU20 508 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 CCDC34Q96HJ3 373 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 CDHR1Q96JP9 859 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 TTC14Q96N46 770 aa11.77□□□□□ -0.53
SCNM1-202ENST00000368905 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 FLT4P35916 1363 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 KIF24Q5T7B8 1368 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 KIF5CO60282 957 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 ZNF132P52740 706 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
SCNM1-202ENST00000368905 RBL2Q08999 1139 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 SEPT2Q15019 361 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
SCNM1-202ENST00000368905 SLC43A3Q8NBI5 491 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
SCNM1-202ENST00000368905 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
SCNM1-202ENST00000368905 NUTM2FA1L443 756 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 IPO7O95373 1038 aaKnown RBP11.75□□□□□ -0.53
SCNM1-202ENST00000368905 TPM2P07951 284 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 ABCD1P33897 745 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 TRPC1P48995 793 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 GSE1Q14687 1217 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 PDXDC1Q6P996 788 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 NLRP2Q9NX02 1062 aa11.75□□□□□ -0.53
SCNM1-202ENST00000368905 CCDC163A0A0D9SF12 145 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 C10orf62Q5T681 223 aaPredicted RBP11.74□□□□□ -0.53
SCNM1-202ENST00000368905 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
SCNM1-202ENST00000368905 ATRIPQ8WXE1 791 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
SCNM1-202ENST00000368905 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 RGPD1P0DJD0 1748 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 ZNF131P52739 623 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 EP400NLQ6ZTU2 488 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 POLR3CQ9BUI4 534 aaPredicted RBP11.74□□□□□ -0.53
SCNM1-202ENST00000368905 IP6K2Q9UHH9 426 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
SCNM1-202ENST00000368905 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 AMPHP49418 695 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
SCNM1-202ENST00000368905 GAS2L2Q8NHY3 880 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
SCNM1-202ENST00000368905 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 ABCC4O15439 1325 aa11.73□□□□□ -0.53
SCNM1-202ENST00000368905 CCDC175P0C221 793 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 TEX19Q8NA77 164 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 PDGFDQ9GZP0 370 aaPredicted RBP11.72□□□□□ -0.53
SCNM1-202ENST00000368905 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
SCNM1-202ENST00000368905 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 CHD2O14647 1828 aaKnown RBP11.72□□□□□ -0.53
SCNM1-202ENST00000368905 CHL1O00533 1208 aa11.72□□□□□ -0.53
SCNM1-202ENST00000368905 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
SCNM1-202ENST00000368905 LMOD1P29536 600 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms