RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 DEKP35659 375 aaKnown RBP9.48□□□□□ -0.89
MUC1-209ENST00000368396 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
MUC1-209ENST00000368396 ZAP70P43403 619 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
MUC1-209ENST00000368396 SCARF1Q14162 830 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 KRT32Q14532 448 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 CCDC129Q6ZRS4 1044 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
MUC1-209ENST00000368396 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 NYXQ9GZU5 481 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 QTRT2Q9H974 415 aaKnown RBP9.48□□□□□ -0.89
MUC1-209ENST00000368396 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
MUC1-209ENST00000368396 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
MUC1-209ENST00000368396 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 ZPR1O75312 459 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 MCAMP43121 646 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 TTF1Q15361 905 aaPredicted RBP9.47□□□□□ -0.89
MUC1-209ENST00000368396 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 NOL8Q76FK4 1167 aaKnown RBP9.47□□□□□ -0.89
MUC1-209ENST00000368396 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
MUC1-209ENST00000368396 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
MUC1-209ENST00000368396 MAST3O60307 1309 aa9.47□□□□□ -0.89
MUC1-209ENST00000368396 M0R2C6 588 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
MUC1-209ENST00000368396 BRD1O95696 1058 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 CPA1P15085 419 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 RPS6KB1P23443 525 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 PHKA1P46020 1223 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 GSE1Q14687 1217 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 SLFNL1Q499Z3 407 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 APPBP2Q92624 585 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 OSBP2Q969R2 916 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 SETDB2Q96T68 719 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.46□□□□□ -0.9
MUC1-209ENST00000368396 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
MUC1-209ENST00000368396 SRP68Q9UHB9 627 aaKnown RBP9.46□□□□□ -0.9
MUC1-209ENST00000368396 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 TAF6LQ9Y6J9 622 aa9.46□□□□□ -0.9
MUC1-209ENST00000368396 MYH7P12883 1935 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 TRAK2O60296 914 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 CYP21A2P08686 494 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
MUC1-209ENST00000368396 CHRNDQ07001 517 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 PKP1Q13835 747 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 ZSCAN25Q6NSZ9 544 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 PI16Q6UXB8 463 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 SMIM5Q71RC9 77 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 AMIGO3Q86WK7 504 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 ANKRD18AQ8IVF6 992 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
MUC1-209ENST00000368396 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
MUC1-209ENST00000368396 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
MUC1-209ENST00000368396 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
MUC1-209ENST00000368396 COL4A1P02462 1669 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 C4AP0C0L4 1744 aa9.45□□□□□ -0.9
MUC1-209ENST00000368396 LARGE1O95461 756 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 ADD2P35612 726 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 UBE3CQ15386 1083 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 SLC27A3Q5K4L6 730 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 TRAPPC3LQ5T215 181 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
MUC1-209ENST00000368396 NEK1Q96PY6 1258 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 LRRC4BQ9NT99 713 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 TPCN1Q9ULQ1 816 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.44□□□□□ -0.9
MUC1-209ENST00000368396 A0A1B0GUL6 1792 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 CASZ1Q86V15 1759 aa9.44□□□□□ -0.9
MUC1-209ENST00000368396 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 GOLGA6L22H0YM25 854 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 FOXP2O15409 715 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 GTF2E1P29083 439 aaPredicted RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 RFC4P35249 363 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 ST3GAL1Q11201 340 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 COL9A3Q14050 684 aaPredicted RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 TOB2Q14106 344 aaPredicted RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 UBE4AQ14139 1066 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 ME3Q16798 604 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 SKOR2Q2VWA4 1001 aaPredicted RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 STOX1Q6ZVD7 989 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 KRT27Q7Z3Y8 459 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 SPATA5Q8NB90 893 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
MUC1-209ENST00000368396 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
MUC1-209ENST00000368396 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
MUC1-209ENST00000368396 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
MUC1-209ENST00000368396 WDR33Q9C0J8 1336 aaKnown RBP9.42□□□□□ -0.9
MUC1-209ENST00000368396 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
MUC1-209ENST00000368396 SNAP23O00161 211 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms