RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 GNL2Q13823 731 aaKnown RBP10.42□□□□□ -0.74
THBS3-201ENST00000368378 LRRC24Q50LG9 513 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 SPECC1Q5M775 1068 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
THBS3-201ENST00000368378 PTPDC1A2A3K4 754 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 EPB41L2O43491 1005 aaKnown RBP10.41□□□□□ -0.74
THBS3-201ENST00000368378 KINO60870 393 aaKnown RBP10.41□□□□□ -0.74
THBS3-201ENST00000368378 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
THBS3-201ENST00000368378 A1BGP04217 495 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 PDCP20941 246 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 CCDC73Q6ZRK6 1079 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 ZNF771Q7L3S4 317 aaPredicted RBP10.41□□□□□ -0.74
THBS3-201ENST00000368378 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 DENND2AQ9ULE3 1009 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 NEURL1BA8MQ27 555 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 GPTP24298 496 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 GCKRQ14397 625 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 ARHGEF25Q86VW2 580 aa10.41□□□□□ -0.74
THBS3-201ENST00000368378 DDX21Q9NR30 783 aaKnown RBP eCLIP10.41□□□□□ -0.74
THBS3-201ENST00000368378 TNNI3KQ59H18 835 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 SYNE4Q8N205 404 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 AIFM3Q96NN9 605 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 MYL10Q9BUA6 226 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 FPGT-TNNI3KV9GXZ4 949 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 USP42Q9H9J4 1324 aaKnown RBP10.4□□□□□ -0.74
THBS3-201ENST00000368378 CPLX1O14810 134 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 HMGN5P82970 282 aaKnown RBP10.4□□□□□ -0.74
THBS3-201ENST00000368378 UVSSAQ2YD98 709 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 MEX3CQ5U5Q3 659 aaKnown RBP10.4□□□□□ -0.74
THBS3-201ENST00000368378 CCDC112Q8NEF3 446 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
THBS3-201ENST00000368378 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 HDAC5Q9UQL6 1122 aa10.4□□□□□ -0.74
THBS3-201ENST00000368378 SKILP12757 684 aa10.4□□□□□ -0.75
THBS3-201ENST00000368378 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.75
THBS3-201ENST00000368378 ZSCAN25Q6NSZ9 544 aa10.4□□□□□ -0.75
THBS3-201ENST00000368378 CCAR2Q8N163 923 aaKnown RBP10.4□□□□□ -0.75
THBS3-201ENST00000368378 C8orf37Q96NL8 207 aa10.4□□□□□ -0.75
THBS3-201ENST00000368378 CCDC94Q9BW85 323 aaPredicted RBP10.4□□□□□ -0.75
THBS3-201ENST00000368378 GOLPH3LQ9H4A5 285 aa10.4□□□□□ -0.75
THBS3-201ENST00000368378 ADGRL3Q9HAR2 1447 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 SNAP23O00161 211 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 CABP4P57796 275 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 STK38Q15208 465 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
THBS3-201ENST00000368378 FUCA2Q9BTY2 467 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 CHD2O14647 1828 aaKnown RBP10.39□□□□□ -0.75
THBS3-201ENST00000368378 ZNF75DP51815 510 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 PDIA6Q15084 440 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 HOMER1Q86YM7 354 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 HELBQ8NG08 1087 aaPredicted RBP10.39□□□□□ -0.75
THBS3-201ENST00000368378 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
THBS3-201ENST00000368378 UBE2Q2LH0YL09 131 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 HIP1O00291 1037 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 IFIT1P09914 478 aaKnown RBP10.38□□□□□ -0.75
THBS3-201ENST00000368378 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
THBS3-201ENST00000368378 ST7Q9NRC1 585 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 COL15A1P39059 1388 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 PTPN12Q05209 780 aaKnown RBP10.38□□□□□ -0.75
THBS3-201ENST00000368378 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
THBS3-201ENST00000368378 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 MCMDC2Q4G0Z9 681 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 TMC6Q7Z403 805 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 GTF3C6Q969F1 213 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 FAM89AQ96GI7 184 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 MAP7D2Q96T17 732 aa10.38□□□□□ -0.75
THBS3-201ENST00000368378 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 N4BP2Q86UW6 1770 aaPredicted RBP10.37□□□□□ -0.75
THBS3-201ENST00000368378 NFAT5O94916 1531 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 C1orf167Q5SNV9 1468 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 CCDC69A6NI79 296 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 ADORA1P30542 326 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 MICU3Q86XE3 530 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 IQSEC3Q9UPP2 1182 aaPredicted RBP10.37□□□□□ -0.75
THBS3-201ENST00000368378 IDH1O75874 414 aaKnown RBP10.37□□□□□ -0.75
THBS3-201ENST00000368378 CEP135Q66GS9 1140 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 PDILTQ8N807 584 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 PHKBQ93100 1093 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 CLSTN2Q9H4D0 955 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 ZSWIM4Q9H7M6 989 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 CLIC4Q9Y696 253 aa10.37□□□□□ -0.75
THBS3-201ENST00000368378 GOLGA8BA8MQT2 603 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 HMGB1P09429 215 aaKnown RBP10.36□□□□□ -0.75
THBS3-201ENST00000368378 TATP17735 454 aaPredicted RBP10.36□□□□□ -0.75
THBS3-201ENST00000368378 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 ZNF215Q9UL58 517 aaPredicted RBP10.36□□□□□ -0.75
THBS3-201ENST00000368378 KLF18A0A0U1RQI7 1052 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 COBLO75128 1261 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 ELF2Q15723 593 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 ZKSCAN3Q9BRR0 538 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 EPC1Q9H2F5 836 aa10.36□□□□□ -0.75
THBS3-201ENST00000368378 IFNKQ9P0W0 207 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms