RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
TMCO1-201ENST00000367881 SLC15A2Q16348 729 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
TMCO1-201ENST00000367881 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 TTC14Q96N46 770 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
TMCO1-201ENST00000367881 SIL1Q9H173 461 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
TMCO1-201ENST00000367881 ABCC12Q96J65 1359 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
TMCO1-201ENST00000367881 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-201ENST00000367881 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMCO1-201ENST00000367881 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 ZSCAN31Q96LW9 406 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-201ENST00000367881 GREM2Q9H772 168 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
TMCO1-201ENST00000367881 STX6O43752 255 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 TPM3P06753 285 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.36
TMCO1-201ENST00000367881 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 TPTE2Q6XPS3 522 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 LSG1Q9H089 658 aaKnown RBP12.77□□□□□ -0.36
TMCO1-201ENST00000367881 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.36
TMCO1-201ENST00000367881 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.36
TMCO1-201ENST00000367881 LRP5O75197 1615 aa12.77□□□□□ -0.37
TMCO1-201ENST00000367881 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
TMCO1-201ENST00000367881 TM4SF1P30408 202 aa12.77□□□□□ -0.37
TMCO1-201ENST00000367881 IFIT5Q13325 482 aaKnown RBP12.77□□□□□ -0.37
TMCO1-201ENST00000367881 NOL8Q76FK4 1167 aaKnown RBP12.77□□□□□ -0.37
TMCO1-201ENST00000367881 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.37
TMCO1-201ENST00000367881 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
TMCO1-201ENST00000367881 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
TMCO1-201ENST00000367881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■■■■□ 21.3
TMCO1-201ENST00000367881 SASH1O94885 1247 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 F13A1P00488 732 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 ITGA6P23229 1130 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 SLC10A5Q5PT55 438 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
TMCO1-201ENST00000367881 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
TMCO1-201ENST00000367881 COL4A1P02462 1669 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 NPHP1O15259 732 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 AK2P54819 239 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 DDR1Q08345 913 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 CCDC152Q4G0S7 254 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 VPS53Q5VIR6 699 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
TMCO1-201ENST00000367881 SERPINB2P05120 415 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 SYT1P21579 422 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 KCNB2Q92953 911 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
TMCO1-201ENST00000367881 EYA2O00167 538 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 POLRMTO00411 1230 aaKnown RBP12.74□□□□□ -0.37
TMCO1-201ENST00000367881 SF3B3Q15393 1217 aaKnown RBP12.74□□□□□ -0.37
TMCO1-201ENST00000367881 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
TMCO1-201ENST00000367881 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 IL25Q9H293 177 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 RIC1Q4ADV7 1423 aa12.74□□□□□ -0.37
TMCO1-201ENST00000367881 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 HIP1O00291 1037 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 CIAO1O76071 339 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.379e-10■■■□□ 16.4
TMCO1-201ENST00000367881 FAM13BQ9NYF5 915 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMCO1-201ENST00000367881 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
TMCO1-201ENST00000367881 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
TMCO1-201ENST00000367881 NLRP3Q96P20 1036 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
TMCO1-201ENST00000367881 KDM4AO75164 1064 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms