RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 SRGAP3O43295 1099 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 UFL1O94874 794 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
NUP43-202ENST00000367402 CHRNDQ07001 517 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
NUP43-202ENST00000367402 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 EYA3Q99504 573 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
NUP43-202ENST00000367402 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
NUP43-202ENST00000367402 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
NUP43-202ENST00000367402 TAF5LO75529 589 aa12.31□□□□□ -0.44
NUP43-202ENST00000367402 KCNJ4P48050 445 aa12.31□□□□□ -0.44
NUP43-202ENST00000367402 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
NUP43-202ENST00000367402 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
NUP43-202ENST00000367402 GPR101Q96P66 508 aaPredicted RBP12.31□□□□□ -0.44
NUP43-202ENST00000367402 ZC3H12CQ9C0D7 883 aaKnown RBP12.31□□□□□ -0.44
NUP43-202ENST00000367402 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
NUP43-202ENST00000367402 TAF1P21675 1872 aa12.31□□□□□ -0.44
NUP43-202ENST00000367402 WTIPA6NIX2 430 aaPredicted RBP12.3□□□□□ -0.44
NUP43-202ENST00000367402 G3V3G9 751 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
NUP43-202ENST00000367402 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
NUP43-202ENST00000367402 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 SIL1Q9H173 461 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 LEMD3Q9Y2U8 911 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
NUP43-202ENST00000367402 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 MTX1Q13505 466 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
NUP43-202ENST00000367402 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 ZNF804BA4D1E1 1349 aa12.29□□□□□ -0.44
NUP43-202ENST00000367402 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
NUP43-202ENST00000367402 FER1L6Q2WGJ9 1857 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 EYA2O00167 538 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 EIF6P56537 245 aaKnown RBP12.28□□□□□ -0.44
NUP43-202ENST00000367402 ZNF784Q8NCA9 323 aaPredicted RBP12.28□□□□□ -0.44
NUP43-202ENST00000367402 ZBTB40Q9NUA8 1239 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
NUP43-202ENST00000367402 MYH3P11055 1940 aa12.28□□□□□ -0.44
NUP43-202ENST00000367402 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 FZD9O00144 591 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 SNAP23O00161 211 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 PLCG2P16885 1265 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
NUP43-202ENST00000367402 COPRSQ9NQ92 184 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
NUP43-202ENST00000367402 ECE2O60344 883 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 CIAO1O76071 339 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
NUP43-202ENST00000367402 PDE8BO95263 885 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 IL15P40933 162 aaPredicted RBP12.26□□□□□ -0.45
NUP43-202ENST00000367402 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 GJA3Q9Y6H8 435 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 ZNF541Q9H0D2 1346 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
NUP43-202ENST00000367402 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 RAD17O75943 681 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 KLRK1P26718 216 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 G3BP1Q13283 466 aaKnown RBP eCLIP12.25□□□□□ -0.454e-6■□□□□ 9.2
NUP43-202ENST00000367402 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 TXNRD3Q86VQ6 643 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 RPAP2Q8IXW5 612 aaPredicted RBP12.25□□□□□ -0.45
NUP43-202ENST00000367402 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 CHD4Q14839 1912 aa12.25□□□□□ -0.45
NUP43-202ENST00000367402 YDJCA8MPS7 323 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
NUP43-202ENST00000367402 COL4A5P29400 1685 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 CXCL9Q07325 125 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 OS9Q13438 667 aaPredicted RBP12.24□□□□□ -0.45
NUP43-202ENST00000367402 TNIP1Q15025 636 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
NUP43-202ENST00000367402 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 GPC2Q8N158 579 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 RRAGCQ9HB90 399 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 KCNQ5Q9NR82 932 aa12.24□□□□□ -0.45
NUP43-202ENST00000367402 SBF1O95248 1867 aa12.23□□□□□ -0.45
NUP43-202ENST00000367402 HMMRO75330 724 aa12.23□□□□□ -0.45
NUP43-202ENST00000367402 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms