RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
SYNE1-206ENST00000367253 GPTP24298 496 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 CLNS1AP54105 237 aaKnown RBP9.83□□□□□ -0.84
SYNE1-206ENST00000367253 FLIIQ13045 1269 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 DYNC1I1O14576 645 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 ABI1Q8IZP0 508 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 MICALL1Q8N3F8 863 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 FIBPO43427 364 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 C1orf228Q6PIY5 440 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 C2CD5Q86YS7 1000 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 USP6NLQ92738 828 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 NOP56O00567 594 aaKnown RBP9.83□□□□□ -0.84
SYNE1-206ENST00000367253 MCM3P25205 808 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 PRKAR2BP31323 418 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 IREB2P48200 963 aaKnown RBP9.83□□□□□ -0.84
SYNE1-206ENST00000367253 NACA2Q9H009 215 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 CWC25Q9NXE8 425 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-206ENST00000367253 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
SYNE1-206ENST00000367253 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 STAMBPO95630 424 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 IDI1Q13907 227 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 CFAP57Q96MR6 1250 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 DACH1Q9UI36 760 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 CEP104O60308 925 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 PRKG1Q13976 671 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 LDHAL6AQ6ZMR3 332 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 CCDC94Q9BW85 323 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-206ENST00000367253 USP25Q9UHP3 1055 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 SATB1Q01826 763 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 DZIP1LQ8IYY4 767 aaKnown RBP9.82□□□□□ -0.84
SYNE1-206ENST00000367253 GGA1Q9UJY5 639 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 CASQ1P31415 396 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 COA7Q96BR5 231 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 SIRT1Q96EB6 747 aa9.82□□□□□ -0.84
SYNE1-206ENST00000367253 ZNF396Q96N95 335 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-206ENST00000367253 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 NLRP5P59047 1200 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 KIF18AQ8NI77 898 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TRIM63Q969Q1 353 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 SLC10A4Q96EP9 437 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TNMDQ9H2S6 317 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 ATP10AO60312 1499 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 MAGI2Q86UL8 1455 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 MINDY4BA8MYZ0 360 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 F8W031 263 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TERF1P54274 439 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 PTPN14Q15678 1187 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 CCDC92Q53HC0 331 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 PDCD7Q8N8D1 485 aaKnown RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 BICD1Q96G01 975 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 SRRTQ9BXP5 876 aaKnown RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 CCDC148Q8NFR7 591 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-206ENST00000367253 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 ARHGAP29Q52LW3 1261 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 ARL10Q8N8L6 244 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 PPFIBP2Q8ND30 876 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 SATB2Q9UPW6 733 aa9.81□□□□□ -0.84
SYNE1-206ENST00000367253 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
SYNE1-206ENST00000367253 RNF8O76064 485 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 LMAN1P49257 510 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 ZNF569Q5MCW4 686 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 UTP14CQ5TAP6 766 aaKnown RBP9.8□□□□□ -0.84
SYNE1-206ENST00000367253 TMC4Q7Z404 712 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 DAAM2Q86T65 1068 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 LRRC27Q9C0I9 530 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 PHAXQ9H814 394 aaKnown RBP9.8□□□□□ -0.84
SYNE1-206ENST00000367253 KIF5CO60282 957 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 GNAQP50148 359 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 DNM2P50570 870 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 PSMD2Q13200 908 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 LNPKQ9C0E8 428 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 CEP131Q9UPN4 1083 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-206ENST00000367253 STK10O94804 968 aaKnown RBP9.8□□□□□ -0.84
SYNE1-206ENST00000367253 CALM1P0DP23 149 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 CALM2P0DP24 149 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 CALM3P0DP25 149 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 CLCN1P35523 988 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 STK38Q15208 465 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 GOLGA1Q92805 767 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
SYNE1-206ENST00000367253 HSP90AA5PQ58FG0 334 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms