RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 TUBB4BP68371 445 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 MAP3K2Q9Y2U5 619 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 FHOD1Q9Y613 1164 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 ABCC6O95255 1503 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 ERBB3P21860 1342 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 DHX16O60231 1041 aaKnown RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 AKAP4Q5JQC9 854 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 DHX32Q7L7V1 743 aaKnown RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 NSUN7Q8NE18 718 aaKnown RBP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 AK7Q96M32 723 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 MPHOSPH8Q99549 860 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMYD3-201ENST00000366516 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
SMYD3-201ENST00000366516 SH3TC1Q8TE82 1336 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 SASH1O94885 1247 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 ZRANB2O95218 330 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 SCRN1Q12765 414 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 MCMDC2Q4G0Z9 681 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 TMC6Q7Z403 805 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 DDX54Q8TDD1 881 aaKnown RBP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 ZNF274Q96GC6 653 aaPredicted RBP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 AGXT2Q9BYV1 514 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 ZNF446Q9NWS9 450 aa10.54□□□□□ -0.72
SMYD3-201ENST00000366516 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
SMYD3-201ENST00000366516 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 NLRP12P59046 1061 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 ARID5BQ14865 1188 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 TCEANC2Q96MN5 208 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 GOLPH3LQ9H4A5 285 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SALL1Q9NSC2 1324 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SETD1BQ9UPS6 1966 aaKnown RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SLC3A2P08195 630 aaKnown RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 PLEKHO1Q53GL0 409 aaPredicted RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 FBXL16Q8N461 479 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 DSCC1Q9BVC3 393 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 XPO4Q9C0E2 1151 aaKnown RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 CCDC8Q9H0W5 538 aaPredicted RBP10.53□□□□□ -0.72
SMYD3-201ENST00000366516 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
SMYD3-201ENST00000366516 COL15A1P39059 1388 aa10.52□□□□□ -0.72
SMYD3-201ENST00000366516 ARHGAP6O43182 974 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 CEBPZQ03701 1054 aaKnown RBP10.52□□□□□ -0.73
SMYD3-201ENST00000366516 STK38Q15208 465 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.73
SMYD3-201ENST00000366516 HELLSQ9NRZ9 838 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 PALLDQ8WX93 1383 aa10.52□□□□□ -0.73
SMYD3-201ENST00000366516 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
SMYD3-201ENST00000366516 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 TADA3O75528 432 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 CTR9Q6PD62 1173 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 JMYQ8N9B5 988 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
SMYD3-201ENST00000366516 SUCLG2Q96I99 432 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 ARFGAP3Q9NP61 516 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 COPRSQ9NQ92 184 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 EID1Q9Y6B2 187 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 CARMIL3Q8ND23 1372 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 MARF1Q9Y4F3 1742 aaKnown RBP10.51□□□□□ -0.73
SMYD3-201ENST00000366516 CYP21A2P08686 494 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 TUBB2AQ13885 445 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 LINC00301Q8NCQ3 95 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 ANKRD24Q8TF21 1146 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 HAUS7Q99871 368 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 TUBB2BQ9BVA1 445 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMYD3-201ENST00000366516 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
SMYD3-201ENST00000366516 PCDHA7Q9UN72 937 aa10.51□□□□□ -0.73
SMYD3-201ENST00000366516 HEG1Q9ULI3 1381 aa10.5□□□□□ -0.73
SMYD3-201ENST00000366516 PLA2G4AP47712 749 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms