RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SLC23A3Q6PIS1 610 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 ATG14Q6ZNE5 492 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 GALNT11Q8NCW6 608 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 UBASH3BQ8TF42 649 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 LIN37Q96GY3 246 aaPredicted RBP1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 TRIM34Q9BYJ4 488 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 PHACTR1Q9C0D0 580 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 SLITRK6Q9H5Y7 841 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 PRKAG2Q9UGJ0 569 aa1.41□□□□□ -2.18
RNU6-54P-201ENST00000365563 FAM170BA6NMN3 283 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 TMEM229AB2RXF0 380 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 APBB1O00213 710 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 FSCN2O14926 492 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 GRIN3BO60391 1043 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 PSAPP07602 524 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 CD8BP10966 210 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 CDC27P30260 824 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZXDAP98168 799 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 PRKCQQ04759 706 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 MAP7Q14244 749 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SKIV2LQ15477 1246 aaKnown RBP1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 MAP7D1Q3KQU3 841 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 TMEM67Q5HYA8 995 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 NUTM2GQ5VZR2 741 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 PRR23BQ6ZRT6 265 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 BARGINQ6ZT62 677 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 HFE2Q6ZVN8 426 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 KRT25Q7Z3Z0 450 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SPRED2Q7Z698 418 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SLC9A9Q8IVB4 645 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 TMEM151BQ8IW70 566 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZNF280CQ8ND82 737 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 C7orf43Q8WVR3 580 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 WNT8BQ93098 351 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SORCS2Q96PQ0 1159 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 KCNC2Q96PR1 638 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SLC26A8Q96RN1 970 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 IRF2BPLQ9H1B7 796 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 EPB41L4BQ9H329 900 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 NSUN3Q9H649 340 aaKnown RBP1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 CYP4F12Q9HCS2 524 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 SEC31BQ9NQW1 1179 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 ADAMTS6Q9UKP5 1117 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 VAV3Q9UKW4 847 aa1.4□□□□□ -2.19
RNU6-54P-201ENST00000365563 LOC102724428A0A0B4J2F2 783 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 TGFBR3LH3BV60 316 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 RFXAPO00287 272 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 SMNDC1O75940 238 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 KRT1P04264 644 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 HOXD8P13378 290 aaPredicted RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 SOX18P35713 384 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 SIK1P57059 783 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 CABP4P57796 275 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 EIF4G2P78344 907 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 PIP4K2BP78356 416 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 PSME1Q06323 249 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 EFEMP1Q12805 493 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 CYP27C1Q4G0S4 372 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 TCERG1LQ5VWI1 586 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZNF765Q7L2R6 523 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 WFDC3Q8IUB2 231 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 NETO1Q8TDF5 533 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 FOXD4L4Q8WXT5 416 aaPredicted RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 COL26A1Q96A83 441 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 NAF1Q96HR8 494 aaKnown RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 KIRREL1Q96J84 757 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 HRASLS5Q96KN8 279 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 CARD10Q9BWT7 1032 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 DCP1AQ9NPI6 582 aaPredicted RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 KCNK4Q9NYG8 393 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 TLR7Q9NYK1 1049 aaKnown RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 CRIM1Q9NZV1 1036 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZFATQ9P243 1243 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 TRIM33Q9UPN9 1127 aa1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 SMG5Q9UPR3 1016 aaKnown RBP1.39□□□□□ -2.19
RNU6-54P-201ENST00000365563 TRIM66O15016 1216 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 ADAM11O75078 769 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 ADMP35318 185 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 ARL4DP49703 201 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 ARSDP51689 593 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 BNIP3Q12983 259 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 IFI16Q16666 785 aaKnown RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 SH3D19Q5HYK7 790 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 CRB2Q5IJ48 1285 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 TXNDC11Q6PKC3 985 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 ARHGAP27Q6ZUM4 889 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 C12orf50Q8NA57 414 aaPredicted RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 MARCH10Q8NA82 808 aaPredicted RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 SLC16A11Q8NCK7 471 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 SMG8Q8ND04 991 aaKnown RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 FBLIM1Q8WUP2 373 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 EZH1Q92800 747 aaPredicted RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 SPACA7Q96KW9 195 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 NSUN5Q96P11 429 aaKnown RBP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 DIRC2Q96SL1 478 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 SUGCTQ9HAC7 445 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 OSGEPQ9NPF4 335 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 CNOT11Q9UKZ1 510 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms