RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PDIA4P13667 645 aaKnown RBP8.54□□□□□ -1.04
RNU4-28P-201ENST00000364739 ORC1Q13415 861 aa8.54□□□□□ -1.04
RNU4-28P-201ENST00000364739 NIF3L1Q9GZT8 377 aa8.54□□□□□ -1.04
RNU4-28P-201ENST00000364739 NFKBIEO00221 500 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 RAC1P63000 192 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 KCNA1Q09470 495 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 FMR1NBQ8N0W7 255 aaPredicted RBP8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 DZANK1Q9NVP4 752 aa8.53□□□□□ -1.04
RNU4-28P-201ENST00000364739 LINC01387J3KSC0 135 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 GPR182O15218 404 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 SELPP16109 830 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 ITGB7P26010 798 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 FAM129BQ96TA1 746 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 OSMRQ99650 979 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 ZKSCAN3Q9BRR0 538 aa8.52□□□□□ -1.05
RNU4-28P-201ENST00000364739 IGHA2P01877 340 aa8.51□□□□□ -1.05
RNU4-28P-201ENST00000364739 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
RNU4-28P-201ENST00000364739 SEMA6BQ9H3T3 888 aa8.51□□□□□ -1.05
RNU4-28P-201ENST00000364739 AMOTL2Q9Y2J4 779 aa8.51□□□□□ -1.05
RNU4-28P-201ENST00000364739 PPME1Q9Y570 386 aa8.51□□□□□ -1.05
RNU4-28P-201ENST00000364739 PDE2AO00408 941 aaPredicted RBP8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 APBA3O96018 575 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 ELNP15502 786 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 MAPK1P28482 360 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 GATA4P43694 442 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 DOC2BQ14184 412 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
RNU4-28P-201ENST00000364739 EPHA1P21709 976 aa8.49□□□□□ -1.05
RNU4-28P-201ENST00000364739 CDC27P30260 824 aa8.49□□□□□ -1.05
RNU4-28P-201ENST00000364739 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
RNU4-28P-201ENST00000364739 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
RNU4-28P-201ENST00000364739 METTL12A8MUP2 240 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 EDN3P14138 238 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 CITED4Q96RK1 184 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
RNU4-28P-201ENST00000364739 PTPRAP18433 802 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 ZMYM1Q5SVZ6 1142 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 DTWD1Q8N5C7 304 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 ASAP3Q8TDY4 903 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 USP21Q9UK80 565 aa8.47□□□□□ -1.05
RNU4-28P-201ENST00000364739 A0A1W2PP55 124 aa8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 DLL1O00548 723 aa8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 LENG1Q96BZ8 264 aaPredicted RBP8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 ADAM19Q9H013 955 aa8.46□□□□□ -1.06
RNU4-28P-201ENST00000364739 C9orf172C9J069 976 aa8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 DDX3YO15523 660 aaKnown RBP8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 CPNE3O75131 537 aaKnown RBP8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 ALX3O95076 343 aa8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 NPHS2Q9NP85 383 aa8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 KCNK4Q9NYG8 393 aa8.45□□□□□ -1.06
RNU4-28P-201ENST00000364739 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 FSCN2O14926 492 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 EPS8L3Q8TE67 593 aaKnown RBP8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 SLC7A3Q8WY07 619 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 DMRTB1Q96MA1 342 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 NACC1Q96RE7 527 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 CSRNP1Q96S65 589 aa8.44□□□□□ -1.06
RNU4-28P-201ENST00000364739 TM4SF5O14894 197 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 NEFLP07196 543 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 SPRED3Q2MJR0 410 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 IGF2-ASQ6U949 168 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 KLHDC7BQ96G42 594 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 MUC3BQ9H195 1237 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 SOX13Q9UN79 622 aa8.43□□□□□ -1.06
RNU4-28P-201ENST00000364739 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 GRIA4P48058 902 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 IREB2P48200 963 aaKnown RBP8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 DSC3Q14574 896 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 FOXD4L6Q3SYB3 417 aaPredicted RBP8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 FOXD4L3Q6VB84 417 aaPredicted RBP8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 VN1R5Q7Z5H4 357 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 TCF12Q99081 682 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
RNU4-28P-201ENST00000364739 SOX1O00570 391 aaPredicted RBP8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 WISP1O95388 367 aa8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 NKAPLQ5M9Q1 402 aa8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 WFDC12Q8WWY7 111 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms