RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 USP17L3A6NCW0 530 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 USP17L4A6NCW7 530 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 FARP2O94887 1054 aaPredicted RBP11.76□□□□□ -0.53
SNORA55-201ENST00000364587 GNRH1P01148 92 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 BCAMP50895 628 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 PRMT2P55345 433 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 MCM10Q7L590 875 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 USP17L1Q7RTZ2 530 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
SNORA55-201ENST00000364587 RPTORQ8N122 1335 aa11.76□□□□□ -0.53
SNORA55-201ENST00000364587 LRRC37AA6NMS7 1700 aa11.75□□□□□ -0.53
SNORA55-201ENST00000364587 TAF7Q15545 349 aaPredicted RBP11.75□□□□□ -0.53
SNORA55-201ENST00000364587 TAF1CQ15572 869 aaPredicted RBP11.75□□□□□ -0.53
SNORA55-201ENST00000364587 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
SNORA55-201ENST00000364587 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
SNORA55-201ENST00000364587 RNF208Q9H0X6 261 aa11.75□□□□□ -0.53
SNORA55-201ENST00000364587 RAPGEFL1Q9UHV5 662 aa11.75□□□□□ -0.53
SNORA55-201ENST00000364587 SH3TC1Q8TE82 1336 aa11.75□□□□□ -0.53
SNORA55-201ENST00000364587 LAMB2P55268 1798 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 UFL1O94874 794 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 CCL5P13501 91 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 GJA5P36382 358 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 ARHGAP39Q9C0H5 1083 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 ANKIB1Q9P2G1 1089 aa11.74□□□□□ -0.53
SNORA55-201ENST00000364587 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
SNORA55-201ENST00000364587 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
SNORA55-201ENST00000364587 SASH1O94885 1247 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 RPS8P62241 208 aaKnown RBP11.73□□□□□ -0.53
SNORA55-201ENST00000364587 LACTBP83111 547 aaPredicted RBP11.73□□□□□ -0.53
SNORA55-201ENST00000364587 HSP90AB3PQ58FF7 597 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
SNORA55-201ENST00000364587 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 GGA1Q9UJY5 639 aa11.73□□□□□ -0.53
SNORA55-201ENST00000364587 GRK4P32298 578 aa11.72□□□□□ -0.53
SNORA55-201ENST00000364587 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
SNORA55-201ENST00000364587 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
SNORA55-201ENST00000364587 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
SNORA55-201ENST00000364587 MS4A4AQ96JQ5 239 aa11.72□□□□□ -0.53
SNORA55-201ENST00000364587 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
SNORA55-201ENST00000364587 SGPL1O95470 568 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 HOXD10P28358 340 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
SNORA55-201ENST00000364587 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 MMP14P50281 582 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 UBXN2AP68543 259 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 SUPT20HL1Q3ZLR7 823 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 RAET1EQ8TD07 263 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 TRIM47Q96LD4 638 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 GUCD1Q96NT3 240 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 RIPOR2Q9Y4F9 1068 aa11.71□□□□□ -0.53
SNORA55-201ENST00000364587 EYSQ5T1H1 3165 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 LAMB1P07942 1786 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 IRS2Q9Y4H2 1338 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 TLR2O60603 784 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
SNORA55-201ENST00000364587 FAM109BQ6ICB4 259 aaPredicted RBP11.7□□□□□ -0.54
SNORA55-201ENST00000364587 BRI3BPQ8WY22 251 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
SNORA55-201ENST00000364587 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 SRRDQ9UH36 339 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
SNORA55-201ENST00000364587 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 CCL15-CCL14A0A0B4J2E2 113 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 TFRCP02786 760 aaKnown RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 CAPN2P17655 700 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 CCL15Q16663 113 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
SNORA55-201ENST00000364587 PNISRQ8TF01 805 aaKnown RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
SNORA55-201ENST00000364587 PSME4Q14997 1843 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 GTF2A2P52657 109 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
SNORA55-201ENST00000364587 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 ZNF428Q96B54 188 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 UBE2OQ9C0C9 1292 aaKnown RBP11.68□□□□□ -0.54
SNORA55-201ENST00000364587 ELP3Q9H9T3 547 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 PPP2R3BQ9Y5P8 575 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
SNORA55-201ENST00000364587 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
SNORA55-201ENST00000364587 MAGEA10P43363 369 aaPredicted RBP11.67□□□□□ -0.54
SNORA55-201ENST00000364587 PSMC4P43686 418 aa11.67□□□□□ -0.54
SNORA55-201ENST00000364587 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
SNORA55-201ENST00000364587 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
SNORA55-201ENST00000364587 C7orf61Q8IZ16 206 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms