RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 TCEANC2Q96MN5 208 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 RBM8AQ9Y5S9 174 aaKnown RBP12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 GOLGA6L7A0A1B0GV03 622 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 PAFAH1B1P43034 410 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 LMAN1P49257 510 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 ISM2Q6H9L7 571 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 HOMER2Q9NSB8 354 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 KIF4AO95239 1232 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 RFX1P22670 979 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 CALML3P27482 149 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 KIF4BQ2VIQ3 1234 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 BMP2KLQ5H9B9 411 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 PPIP5K2O43314 1243 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 GRPEL1Q9HAV7 217 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
CACNA1S-201ENST00000362061 FAM13AO94988 1023 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 AFMP43652 599 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 DYDC1Q8WWB3 177 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 SPAG5Q96R06 1193 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 PDE8AO60658 829 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 GNA11P29992 359 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 RRAGBQ5VZM2 374 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 PDE1AP54750 535 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 ASIC1P78348 528 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 Q6ZUG5 572 aa12.06□□□□□ -0.48
CACNA1S-201ENST00000362061 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 APBB1IPQ7Z5R6 666 aaPredicted RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 ALS2CR12Q96Q35 445 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 ATP10AO60312 1499 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 MBD4O95243 580 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 SMCR8Q8TEV9 937 aaPredicted RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 ZSCAN16Q9H4T2 348 aaPredicted RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 A1BGP04217 495 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 SYKP43405 635 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 DLGAP5Q15398 846 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 CCDC117Q8IWD4 279 aaPredicted RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 IFFO1Q0D2I5 559 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 PUM3Q15397 648 aaKnown RBP12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
CACNA1S-201ENST00000362061 SDSP20132 328 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 RXRBP28702 533 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 MRPS9P82933 396 aaKnown RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 WDR66Q8TBY9 1149 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 UBXN4Q92575 508 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 N4BP3O15049 544 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 RGS22Q8NE09 1264 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 PUS7Q96PZ0 661 aaKnown RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 CRACR2AQ9BSW2 395 aa12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 NUP153P49790 1475 aaKnown RBP12.04□□□□□ -0.48
CACNA1S-201ENST00000362061 STX1AQ16623 288 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 CASQ1P31415 396 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 TCP10Q12799 353 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 PODXL2Q9NZ53 605 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 CSADQ9Y600 493 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 ABCC2Q92887 1545 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 KIF22Q14807 665 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
CACNA1S-201ENST00000362061 EYA2O00167 538 aa12.02□□□□□ -0.48
CACNA1S-201ENST00000362061 SSFA2P28290 1259 aa12.02□□□□□ -0.48
CACNA1S-201ENST00000362061 KRT2P35908 639 aa12.02□□□□□ -0.48
CACNA1S-201ENST00000362061 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.48
CACNA1S-201ENST00000362061 TTC41PQ6P2S7 1318 aa12.02□□□□□ -0.48
CACNA1S-201ENST00000362061 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms