RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 YEATS4O95619 227 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 CALM1P0DP23 149 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 CALM2P0DP24 149 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 CALM3P0DP25 149 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 KANK3Q6NY19 840 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 CCDC191Q8NCU4 936 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 ZKSCAN3Q9BRR0 538 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 DENND2AQ9ULE3 1009 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 ZSCAN12O43309 604 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 TAF3Q5VWG9 929 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 HIBADHP31937 336 aaKnown RBP21.3■■□□□ 1
CLIP2-202ENST00000361545 ANAPC15P60006 121 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 PDE8AO60658 829 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 APBA3O96018 575 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 ZNF496Q96IT1 587 aaPredicted RBP21.29■■□□□ 1
CLIP2-202ENST00000361545 STAT6P42226 847 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 UBE2HP62256 183 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 CREB3L3Q68CJ9 461 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 ESPNB1AK53 854 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 TAF5LO75529 589 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 TNNI2P48788 182 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 MTERF4Q7Z6M4 381 aaKnown RBP21.29■■□□□ 1
CLIP2-202ENST00000361545 PUF60Q9UHX1 559 aaKnown RBP21.29■■□□□ 1
CLIP2-202ENST00000361545 KIF5CO60282 957 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 ZNF165P49910 485 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 TEX11Q8IYF3 940 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 RRP36Q96EU6 259 aaKnown RBP21.29■■□□□ 1
CLIP2-202ENST00000361545 TRIM47Q96LD4 638 aa21.29■■□□□ 1
CLIP2-202ENST00000361545 TMX1Q9H3N1 280 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 PTPN14Q15678 1187 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 TMC6Q7Z403 805 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 LRRC27Q9C0I9 530 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 C6orf50Q9HD87 102 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 PLEKHM2Q8IWE5 1019 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 CCDC171Q6TFL3 1326 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 SPDYE3A6NKU9 549 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 KIF4BQ2VIQ3 1234 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 CNPY2Q9Y2B0 182 aa21.28■■□□□ 1
CLIP2-202ENST00000361545 CFAP65Q6ZU64 1925 aaKnown RBP21.28■■□□□ 1
CLIP2-202ENST00000361545 GGA1Q9UJY5 639 aa21.27■■□□□ 1
CLIP2-202ENST00000361545 USP19O94966 1318 aa21.27■■□□□ 1
CLIP2-202ENST00000361545 PUM3Q15397 648 aaKnown RBP21.27■■□□□ 1
CLIP2-202ENST00000361545 CTNNBL1Q8WYA6 563 aaPredicted RBP21.27■■□□□ 1
CLIP2-202ENST00000361545 DBNDD2Q9BQY9 259 aa21.27■■□□□ 1
CLIP2-202ENST00000361545 CHL1O00533 1208 aa21.27■■□□□ 1
CLIP2-202ENST00000361545 RAB3GAP1Q15042 981 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 RRAGBQ5VZM2 374 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 UBXN4Q92575 508 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 ZFYVE16Q7Z3T8 1539 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 RTL9Q8NET4 1388 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 CCDC174Q6PII3 467 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 TTC6Q86TZ1 520 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 TRMT1Q9NXH9 659 aaKnown RBP21.26■□□□□ 0.99
CLIP2-202ENST00000361545 GIMAP6Q6P9H5 292 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
CLIP2-202ENST00000361545 BMP15O95972 392 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 HSP90AA4PQ58FG1 418 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 TNNI3KQ59H18 835 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 FPGT-TNNI3KV9GXZ4 949 aa21.26■□□□□ 0.99
CLIP2-202ENST00000361545 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 XAGE2Q96GT9 111 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 BABAM1Q9NWV8 329 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 USO1O60763 962 aaKnown RBP21.25■□□□□ 0.99
CLIP2-202ENST00000361545 FAM114A1Q8IWE2 563 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 KCNG4Q8TDN1 519 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 URI1O94763 535 aaPredicted RBP21.25■□□□□ 0.99
CLIP2-202ENST00000361545 CHMLP26374 656 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 AK2P54819 239 aa21.25■□□□□ 0.99
CLIP2-202ENST00000361545 H0YIN7 160 aa21.24■□□□□ 0.99
CLIP2-202ENST00000361545 HOXB7P09629 217 aa21.24■□□□□ 0.99
CLIP2-202ENST00000361545 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
CLIP2-202ENST00000361545 ARMT1Q9H993 441 aa21.24■□□□□ 0.99
CLIP2-202ENST00000361545 DHX32Q7L7V1 743 aaKnown RBP21.24■□□□□ 0.99
CLIP2-202ENST00000361545 FERMT2Q96AC1 680 aa21.24■□□□□ 0.99
CLIP2-202ENST00000361545 TRIM75PA6NK02 468 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 ABCA5Q8WWZ7 1642 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 UQCRHLA0A096LP55 91 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 N4BP3O15049 544 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 EIF3JO75822 258 aaKnown RBP21.23■□□□□ 0.99
CLIP2-202ENST00000361545 UQCRHP07919 91 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 NEO1Q92859 1461 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 LARGE2Q8N3Y3 721 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 SUCLG2Q96I99 432 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 EIF6P56537 245 aaKnown RBP21.23■□□□□ 0.99
CLIP2-202ENST00000361545 LEKR1Q6ZMV7 388 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 CCDC102AQ96A19 550 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 ZNF408Q9H9D4 720 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 RMND1Q9NWS8 449 aa21.23■□□□□ 0.99
CLIP2-202ENST00000361545 SP4Q02446 784 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 ZSCAN30Q86W11 494 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 ASIC1P78348 528 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 CALML3P27482 149 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 CASQ1P31415 396 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 DNM1Q05193 864 aaKnown RBP21.22■□□□□ 0.99
CLIP2-202ENST00000361545 OTUD7AQ8TE49 926 aaPredicted RBP21.22■□□□□ 0.99
CLIP2-202ENST00000361545 DRC1Q96MC2 740 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms