RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 F8W031 263 aaPredicted RBP13.79□□□□□ -0.2
HPS1-204ENST00000361490 GPAA1O43292 621 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 RAD21O60216 631 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
HPS1-204ENST00000361490 OSBP2Q969R2 916 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 ZNF622Q969S3 477 aaKnown RBP eCLIP13.79□□□□□ -0.2
HPS1-204ENST00000361490 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
HPS1-204ENST00000361490 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 MCAMP43121 646 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 RPS8P62241 208 aaKnown RBP13.78□□□□□ -0.2
HPS1-204ENST00000361490 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
HPS1-204ENST00000361490 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
HPS1-204ENST00000361490 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 MBD4O95243 580 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 NUP133Q8WUM0 1156 aa13.78□□□□□ -0.2
HPS1-204ENST00000361490 NCOA5Q9HCD5 579 aaKnown RBP13.78□□□□□ -0.2
HPS1-204ENST00000361490 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
HPS1-204ENST00000361490 LARGE1O95461 756 aa13.77□□□□□ -0.2
HPS1-204ENST00000361490 RNF214Q8ND24 703 aa13.77□□□□□ -0.2
HPS1-204ENST00000361490 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.2
HPS1-204ENST00000361490 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.2
HPS1-204ENST00000361490 MARF1Q9Y4F3 1742 aaKnown RBP13.77□□□□□ -0.21
HPS1-204ENST00000361490 ATP2B1P20020 1258 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 KRT32Q14532 448 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 M0R2C6 588 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 CYP21A2P08686 494 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
HPS1-204ENST00000361490 RPS6KA4O75676 772 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 UQCRFS1P1P0C7P4 283 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
HPS1-204ENST00000361490 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 NYXQ9GZU5 481 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
HPS1-204ENST00000361490 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
HPS1-204ENST00000361490 CIAO1O76071 339 aa13.76□□□□□ -0.21
HPS1-204ENST00000361490 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 ME3Q16798 604 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 BRPF3Q9ULD4 1205 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 MAST3O60307 1309 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 PHRF1Q9P1Y6 1649 aaKnown RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 PRDM1O75626 825 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 PIH1D3Q9NQM4 214 aaKnown RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 SPATA31A6Q5VVP1 1343 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
HPS1-204ENST00000361490 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
HPS1-204ENST00000361490 RANBP6O60518 1105 aaKnown RBP13.74□□□□□ -0.21
HPS1-204ENST00000361490 FGAP02671 866 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
HPS1-204ENST00000361490 CSF1RP07333 972 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
HPS1-204ENST00000361490 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
HPS1-204ENST00000361490 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
HPS1-204ENST00000361490 STX6O43752 255 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 ST5P78524 1137 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 SDR42E1Q8WUS8 393 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 APPBP2Q92624 585 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 ERICH2A1L162 156 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
HPS1-204ENST00000361490 B4E1Z4 1266 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 PRKAB2O43741 272 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 JAK2O60674 1132 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 PDE6AP16499 860 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 NECTIN1Q15223 517 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
HPS1-204ENST00000361490 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
HPS1-204ENST00000361490 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
HPS1-204ENST00000361490 SYT1P21579 422 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
HPS1-204ENST00000361490 LMO7Q8WWI1 1683 aa13.73□□□□□ -0.21
HPS1-204ENST00000361490 NTSR2O95665 410 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 NFIXQ14938 502 aa13.72□□□□□ -0.21
HPS1-204ENST00000361490 NAA16Q6N069 864 aaPredicted RBP13.72□□□□□ -0.21
HPS1-204ENST00000361490 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms