RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 TAF12Q16514 161 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 NSRP1Q9H0G5 558 aaKnown RBP23.05■■□□□ 1.28
SMURF1-202ENST00000361368 NDC80O14777 642 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 ARL1P40616 181 aaPredicted RBP23.05■■□□□ 1.28
SMURF1-202ENST00000361368 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 TACC1O75410 805 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 HDAC1Q13547 482 aaPredicted RBP23.05■■□□□ 1.28
SMURF1-202ENST00000361368 SPATA24Q86W54 205 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
SMURF1-202ENST00000361368 DDX23Q9BUQ8 820 aaKnown RBP23.04■■□□□ 1.28
SMURF1-202ENST00000361368 NUCB1Q02818 461 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 RGS22Q8NE09 1264 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 MCM9Q9NXL9 1143 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 KRT2P35908 639 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 POLR3GO15318 223 aaPredicted RBP23.03■■□□□ 1.28
SMURF1-202ENST00000361368 RNF113AO15541 343 aaKnown RBP23.03■■□□□ 1.28
SMURF1-202ENST00000361368 LDHBP07195 334 aaKnown RBP23.03■■□□□ 1.28
SMURF1-202ENST00000361368 KRT83P78385 493 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 CEP135Q66GS9 1140 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 Q6ZUG5 572 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 TTC6Q86TZ1 520 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
SMURF1-202ENST00000361368 TMX3Q96JJ7 454 aa23.03■■□□□ 1.28
SMURF1-202ENST00000361368 CUL7Q14999 1698 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 TTC41PQ6P2S7 1318 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 LINS1Q8NG48 757 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 NSFL1CQ9UNZ2 370 aaKnown RBP23.02■■□□□ 1.28
SMURF1-202ENST00000361368 CTAGE15A4D2H0 777 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 CTAGE8P0CG41 777 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 TSHZ3Q63HK5 1081 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 CTAGE6Q86UF2 777 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 CTAGE4Q8IX94 777 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 FBF1Q8TES7 1133 aa23.02■■□□□ 1.28
SMURF1-202ENST00000361368 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.27
SMURF1-202ENST00000361368 UHRF1BP1LA0JNW5 1464 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 TUBB4AP04350 444 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 EEF2P13639 858 aaKnown RBP23.01■■□□□ 1.27
SMURF1-202ENST00000361368 PDE1AP54750 535 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 CALCOCO1Q9P1Z2 691 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 BMS1Q14692 1282 aaKnown RBP23.01■■□□□ 1.27
SMURF1-202ENST00000361368 KLHL40Q2TBA0 621 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 GSTA5Q7RTV2 222 aa23.01■■□□□ 1.27
SMURF1-202ENST00000361368 SDSP20132 328 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 SLC39A6Q13433 755 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 ANKRD44Q8N8A2 993 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
SMURF1-202ENST00000361368 RBM28Q9NW13 759 aaKnown RBP23■■□□□ 1.27
SMURF1-202ENST00000361368 RBM26Q5T8P6 1007 aaKnown RBP23■■□□□ 1.27
SMURF1-202ENST00000361368 NECAB1Q8N987 351 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 ESYT1Q9BSJ8 1104 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 TEX14Q8IWB6 1497 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 PPFIA3O75145 1194 aa23■■□□□ 1.27
SMURF1-202ENST00000361368 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
SMURF1-202ENST00000361368 CCDC14Q49A88 953 aa22.99■■□□□ 1.27
SMURF1-202ENST00000361368 MEIS3Q99687 375 aa22.99■■□□□ 1.27
SMURF1-202ENST00000361368 TTC14Q96N46 770 aa22.99■■□□□ 1.27
SMURF1-202ENST00000361368 SLU7O95391 586 aaKnown RBP22.98■■□□□ 1.27
SMURF1-202ENST00000361368 FAM212AQ96EL1 285 aa22.98■■□□□ 1.27
SMURF1-202ENST00000361368 BACH1O14867 736 aa22.98■■□□□ 1.27
SMURF1-202ENST00000361368 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
SMURF1-202ENST00000361368 RPL13P26373 211 aaKnown RBP22.98■■□□□ 1.27
SMURF1-202ENST00000361368 BRDTQ58F21 947 aaPredicted RBP22.98■■□□□ 1.27
SMURF1-202ENST00000361368 NEK11Q8NG66 645 aa22.98■■□□□ 1.27
SMURF1-202ENST00000361368 LRRC2Q9BYS8 371 aa22.98■■□□□ 1.27
SMURF1-202ENST00000361368 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
SMURF1-202ENST00000361368 ATP2A2P16615 1042 aaKnown RBP22.97■■□□□ 1.27
SMURF1-202ENST00000361368 DHX58Q96C10 678 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 KRT86O43790 486 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 PLCB3Q01970 1234 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 TTC16Q8NEE8 873 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 SPTLC2O15270 562 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 KIF5AQ12840 1032 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 DENND2AQ9ULE3 1009 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 PLCH2O75038 1416 aa22.97■■□□□ 1.27
SMURF1-202ENST00000361368 CDCA7Q9BWT1 371 aaPredicted RBP22.96■■□□□ 1.27
SMURF1-202ENST00000361368 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 MXRA7P84157 204 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 CCDC50Q8IVM0 306 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 MAGEB6Q8N7X4 407 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 DPH6Q7L8W6 267 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
SMURF1-202ENST00000361368 TXNDC16Q9P2K2 825 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 PCDH11XQ9BZA7 1347 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 PCDH11YQ9BZA8 1340 aa22.96■■□□□ 1.27
SMURF1-202ENST00000361368 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.95■■□□□ 1.27
SMURF1-202ENST00000361368 TBC1D32Q96NH3 1257 aa22.95■■□□□ 1.27
SMURF1-202ENST00000361368 FLT4P35916 1363 aa22.95■■□□□ 1.27
SMURF1-202ENST00000361368 OPA1O60313 960 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 NMIQ13287 307 aaPredicted RBP22.95■■□□□ 1.26
SMURF1-202ENST00000361368 TRAPPC3LQ5T215 181 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 FAM200AQ8TCP9 573 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 GJC1P36383 396 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 DTHD1Q6ZMT9 781 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 CCDC42Q96M95 316 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 RTL1A6NKG5 1358 aa22.95■■□□□ 1.26
SMURF1-202ENST00000361368 PARP1P09874 1014 aaKnown RBP22.95■■□□□ 1.26
SMURF1-202ENST00000361368 PPP1R2P41236 205 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms