RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 BEND3Q5T5X7 828 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
TOP1-201ENST00000361337 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 EPB41L2O43491 1005 aaKnown RBP10.68□□□□□ -0.7
TOP1-201ENST00000361337 TRIM37O94972 964 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 CREB3L3Q68CJ9 461 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 ZSCAN25Q6NSZ9 544 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 TNMDQ9H2S6 317 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 CHGBP05060 677 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 SYNE4Q8N205 404 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 BICC1Q9H694 974 aaKnown RBP10.67□□□□□ -0.7
TOP1-201ENST00000361337 TLR7Q9NYK1 1049 aaKnown RBP10.67□□□□□ -0.7
TOP1-201ENST00000361337 ZBTB1Q9Y2K1 713 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 KRT85P78386 507 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 PGBD1Q96JS3 809 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 ZNF831Q5JPB2 1677 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 JAK2O60674 1132 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 ZNF75DP51815 510 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 METTL24Q5JXM2 366 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
TOP1-201ENST00000361337 CCDC171Q6TFL3 1326 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 AK7Q96M32 723 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 CWC25Q9NXE8 425 aaPredicted RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 ABCF2Q9UG63 623 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 ANKARQ7Z5J8 1434 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 A0A0D9SFI3 127 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 SLC4A8Q2Y0W8 1093 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 LDHAL6AQ6ZMR3 332 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 PLA2G4DQ86XP0 818 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 EDC3Q96F86 508 aaKnown RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 SLC27A2O14975 620 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 TIMM10P62072 90 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 CEBPZQ03701 1054 aaKnown RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 LEO1Q8WVC0 666 aaPredicted RBP10.66□□□□□ -0.7
TOP1-201ENST00000361337 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
TOP1-201ENST00000361337 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
TOP1-201ENST00000361337 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 RFC4P35249 363 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 TOB2Q14106 344 aaPredicted RBP10.65□□□□□ -0.7
TOP1-201ENST00000361337 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 SPATA32Q96LK8 384 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 SH2B1Q9NRF2 756 aaPredicted RBP10.65□□□□□ -0.7
TOP1-201ENST00000361337 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.7
TOP1-201ENST00000361337 C5P01031 1676 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
TOP1-201ENST00000361337 CCDC112Q8NEF3 446 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 ERCC4Q92889 916 aaPredicted RBP10.65□□□□□ -0.7
TOP1-201ENST00000361337 SUCLG2Q96I99 432 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 ECHDC1Q9NTX5 307 aa10.65□□□□□ -0.7
TOP1-201ENST00000361337 ZNF165P49910 485 aa10.65□□□□□ -0.71
TOP1-201ENST00000361337 IFIT5Q13325 482 aaKnown RBP10.65□□□□□ -0.71
TOP1-201ENST00000361337 HOMER1Q86YM7 354 aa10.65□□□□□ -0.71
TOP1-201ENST00000361337 LINS1Q8NG48 757 aa10.65□□□□□ -0.71
TOP1-201ENST00000361337 KCNB2Q92953 911 aa10.65□□□□□ -0.71
TOP1-201ENST00000361337 TIGD1Q96MW7 591 aa10.65□□□□□ -0.71
TOP1-201ENST00000361337 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 MSL1Q68DK7 614 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 C11orf57Q6ZUT1 292 aaPredicted RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 ZSCAN31Q96LW9 406 aaPredicted RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 TFCP2L1Q9NZI6 479 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 ADCY9O60503 1353 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 USP42Q9H9J4 1324 aaKnown RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 IDH1O75874 414 aaKnown RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 MAP4K1Q92918 833 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 EAF2Q96CJ1 260 aaPredicted RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
TOP1-201ENST00000361337 TMX4Q9H1E5 349 aaPredicted RBP10.64□□□□□ -0.71
TOP1-201ENST00000361337 RAD21O60216 631 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 TPM3P06753 285 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 DDX46Q7L014 1031 aaKnown RBP10.63□□□□□ -0.71
TOP1-201ENST00000361337 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 NUP188Q5SRE5 1749 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 TNS3Q68CZ2 1445 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 AFF2P51816 1311 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 ZKSCAN1P17029 563 aaPredicted RBP10.63□□□□□ -0.71
TOP1-201ENST00000361337 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
TOP1-201ENST00000361337 CLSTN2Q9H4D0 955 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 SMTNL1A8MU46 457 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 SASH1O94885 1247 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 RUFY2Q8WXA3 655 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 TRMT1Q9NXH9 659 aaKnown RBP10.63□□□□□ -0.71
TOP1-201ENST00000361337 ELP1O95163 1332 aa10.63□□□□□ -0.71
TOP1-201ENST00000361337 PXDNLA1KZ92 1463 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 LOC102724428A0A0B4J2F2 783 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 SNAP23O00161 211 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 SIK1P57059 783 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 TEX35Q5T0J7 233 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms