RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 MMP10P09238 476 aa25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 NMIQ13287 307 aaPredicted RBP25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 AKAP11Q9UKA4 1901 aa25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 PTGER2P43116 358 aa25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 KIF2CQ99661 725 aa25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 BRIP1Q9BX63 1249 aa25.35■■□□□ 1.65
MAP1LC3A-201ENST00000360668 HOXA10P31260 410 aaPredicted RBP25.34■■□□□ 1.65
MAP1LC3A-201ENST00000360668 PHKA1P46020 1223 aa25.34■■□□□ 1.65
MAP1LC3A-201ENST00000360668 FKBP4Q02790 459 aaKnown RBP eCLIP25.34■■□□□ 1.65
MAP1LC3A-201ENST00000360668 SCARF1Q14162 830 aa25.34■■□□□ 1.65
MAP1LC3A-201ENST00000360668 SNAP23O00161 211 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 MCCP23508 829 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 MCAMP43121 646 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 KIAA1211Q6ZU35 1233 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 FAM227BQ96M60 508 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 ANKRD31Q8N7Z5 1873 aa25.33■■□□□ 1.65
MAP1LC3A-201ENST00000360668 ZAP70P43403 619 aa25.32■■□□□ 1.64
MAP1LC3A-201ENST00000360668 LRRFIP1Q32MZ4 808 aaKnown RBP25.32■■□□□ 1.64
MAP1LC3A-201ENST00000360668 LSG1Q9H089 658 aaKnown RBP25.32■■□□□ 1.64
MAP1LC3A-201ENST00000360668 A0A0D9SFI3 127 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 SLC16A10Q8TF71 515 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 CRAMP1Q96RY5 1269 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 BECN1Q14457 450 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 TTF1Q15361 905 aaPredicted RBP25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 MSL1Q68DK7 614 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 SGIP1Q9BQI5 828 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 ANTXR1Q9H6X2 564 aa25.31■■□□□ 1.64
MAP1LC3A-201ENST00000360668 BBOX1O75936 387 aa25.29■■□□□ 1.64
MAP1LC3A-201ENST00000360668 ZNF804BA4D1E1 1349 aa25.29■■□□□ 1.64
MAP1LC3A-201ENST00000360668 RNF113AO15541 343 aaKnown RBP25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 PDE6BP35913 854 aa25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 KCNJ4P48050 445 aa25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 BCAMP50895 628 aa25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 ANAPC15P60006 121 aa25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 HELLSQ9NRZ9 838 aa25.28■■□□□ 1.64
MAP1LC3A-201ENST00000360668 ZFYP08048 801 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 RABEP1Q15276 862 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 MCMDC2Q4G0Z9 681 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 PI16Q6UXB8 463 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 TMC4Q7Z404 712 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 SPATA5Q8NB90 893 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 IL17RAQ96F46 866 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 HMG20BQ9P0W2 317 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 HSPA4P34932 840 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 CAVIN4Q5BKX8 364 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 ZMYM1Q5SVZ6 1142 aa25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 GNL3LQ9NVN8 582 aaKnown RBP25.27■■□□□ 1.64
MAP1LC3A-201ENST00000360668 CCDC171Q6TFL3 1326 aa25.26■■□□□ 1.63
MAP1LC3A-201ENST00000360668 CYP2E1P05181 493 aaPredicted RBP25.26■■□□□ 1.63
MAP1LC3A-201ENST00000360668 RASGRF1Q13972 1273 aa25.26■■□□□ 1.63
MAP1LC3A-201ENST00000360668 LEMD3Q9Y2U8 911 aa25.26■■□□□ 1.63
MAP1LC3A-201ENST00000360668 MYH7P12883 1935 aa25.25■■□□□ 1.63
MAP1LC3A-201ENST00000360668 SNX21Q969T3 373 aa25.25■■□□□ 1.63
MAP1LC3A-201ENST00000360668 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.25■■□□□ 1.63
MAP1LC3A-201ENST00000360668 XDHP47989 1333 aa25.25■■□□□ 1.63
MAP1LC3A-201ENST00000360668 SRGNP10124 158 aa25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 NPR1P16066 1061 aa25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 PTH1RQ03431 593 aa25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ZSCAN25Q6NSZ9 544 aa25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 FBXO33Q7Z6M2 555 aa25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 FAM84BQ96KN1 310 aaPredicted RBP25.24■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ZBTB22O15209 634 aa25.23■■□□□ 1.63
MAP1LC3A-201ENST00000360668 GYG1P46976 350 aa25.23■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ZNF589Q86UQ0 364 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ANKIB1Q9P2G1 1089 aa25.23■■□□□ 1.63
MAP1LC3A-201ENST00000360668 LRRC37AA6NMS7 1700 aa25.23■■□□□ 1.63
MAP1LC3A-201ENST00000360668 WTIPA6NIX2 430 aaPredicted RBP25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 CHGBP05060 677 aa25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 MAP4K1Q92918 833 aa25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 TBC1D2Q9BYX2 928 aa25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 PIH1D3Q9NQM4 214 aaKnown RBP25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 VPS37DQ86XT2 251 aa25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 IRS2Q9Y4H2 1338 aa25.22■■□□□ 1.63
MAP1LC3A-201ENST00000360668 DOCK2Q92608 1830 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 SEMA3EO15041 775 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ALDH1B1P30837 517 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 MASTLQ96GX5 879 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 PALD1Q9ULE6 856 aa25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 COL11A2P13942 1736 aaPredicted RBP25.21■■□□□ 1.63
MAP1LC3A-201ENST00000360668 C15orf52Q6ZUT6 534 aaKnown RBP25.2■■□□□ 1.62
MAP1LC3A-201ENST00000360668 KCNB2Q92953 911 aa25.2■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SEC62Q99442 399 aaKnown RBP25.2■■□□□ 1.62
MAP1LC3A-201ENST00000360668 DENND2AQ9ULE3 1009 aa25.2■■□□□ 1.62
MAP1LC3A-201ENST00000360668 PPEF1O14829 653 aaPredicted RBP25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 HIBADHP31937 336 aaKnown RBP25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 GPSM2P81274 684 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 HSCBQ8IWL3 235 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SP8Q8IXZ3 490 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 IL27Q8NEV9 243 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 APPBP2Q92624 585 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 PODXL2Q9NZ53 605 aa25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 PDS5AQ29RF7 1337 aaKnown RBP25.19■■□□□ 1.62
MAP1LC3A-201ENST00000360668 MAST3O60307 1309 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 KLRK1P26718 216 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms