RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SLC45A1Q9Y2W3 748 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 GDF15Q99988 308 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 NF2P35240 595 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 GJA5P36382 358 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 SP3Q02447 781 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 NCBP3Q53F19 620 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZBTB38Q8NAP3 1195 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 RTF1Q92541 710 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 NUDCQ9Y266 331 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 FOCADQ5VW36 1801 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 PCCAP05165 728 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 RPS8P62241 208 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 CELF1Q92879 486 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 PTPN18Q99952 460 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 PNNQ9H307 717 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 LEMD3Q9Y2U8 911 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 MYH13Q9UKX3 1938 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 GJB1P08034 283 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 IRF5Q13568 498 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 CFAP53Q96M91 514 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 CHL1O00533 1208 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 FKBP1CQ5VVH2 108 aa7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-201ENST00000360515 IL1R1P14778 569 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 CRHR2Q13324 411 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 DLK2Q6UY11 383 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 HTATIP2Q9BUP3 242 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 KCNQ5Q9NR82 932 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 GGA1Q9UJY5 639 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 MCM10Q7L590 875 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 EFCC1Q9HA90 598 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 TRIM17Q9Y577 477 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 ATAD5Q96QE3 1844 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 RLFQ13129 1914 aa7.93□□□□□ -1.14
CDC42SE2-201ENST00000360515 USP2O75604 605 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 C17orf99Q6UX52 265 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 HTTP42858 3142 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 UBE2Q2LH0YL09 131 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 PXYLP1Q8TE99 480 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 TMEM106CQ9BVX2 250 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZNF408Q9H9D4 720 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 A0A0G2JMZ2 1700 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 PPP2R1AP30153 589 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 CCDC191Q8NCU4 936 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 CFAP44Q96MT7 982 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 TEPSINQ96N21 525 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 DBNDD1Q9H9R9 158 aa7.92□□□□□ -1.14
CDC42SE2-201ENST00000360515 HDLBPQ00341 1268 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 NOL9Q5SY16 702 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 ANKRD13AQ8IZ07 590 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZC3H12CQ9C0D7 883 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 PAK6Q9NQU5 681 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 PIP4K2AP48426 406 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 GTF2A2P52657 109 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 MOGSQ13724 837 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 ANKRD23Q86SG2 305 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZNF112Q9UJU3 913 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 KCNH4Q9UQ05 1017 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 TMEM265A0A087WTH1 108 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 SPDYE5A6NIY4 337 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 TLR2O60603 784 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZNF853P0CG23 659 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 SUPT20HL1Q3ZLR7 823 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 HYPKQ9NX55 129 aa7.91□□□□□ -1.14
CDC42SE2-201ENST00000360515 PDE8AO60658 829 aa7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 LACTBP83111 547 aaPredicted RBP7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 ZBTB3Q9H5J0 574 aa7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 PTCH2Q9Y6C5 1203 aa7.9□□□□□ -1.14
CDC42SE2-201ENST00000360515 POTEB2H3BUK9 544 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 GPTP24298 496 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 PROSER3Q2NL68 480 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 NBPF9Q3BBW0 867 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 ZFYVE28Q9HCC9 887 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 MTMR10Q9NXD2 777 aa7.9□□□□□ -1.15
CDC42SE2-201ENST00000360515 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SLC17A8Q8NDX2 589 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 TRMT112Q9UI30 125 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 CSF1RP07333 972 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 LMOD3Q0VAK6 560 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 GRM1Q13255 1194 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 PPIL2Q13356 520 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 CCDC152Q4G0S7 254 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 COPS6Q7L5N1 327 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SLAIN1Q8ND83 568 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 BRI3BPQ8WY22 251 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 RFX7Q2KHR2 1363 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 HCLS1P14317 486 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 SRRDQ9UH36 339 aa7.89□□□□□ -1.15
CDC42SE2-201ENST00000360515 AK9Q5TCS8 1911 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms