RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PLA2G4AP47712 749 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 MIS18AQ9NYP9 233 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 NPHP1O15259 732 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 NRDCO43847 1150 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 KCNJ6P48051 423 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 GPS2Q13227 327 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 NECTIN1Q15223 517 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
UBAP1-202ENST00000359544 OSBPL5Q9H0X9 879 aaPredicted RBP17.42■□□□□ 0.38
UBAP1-202ENST00000359544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBAP1-202ENST00000359544 DTNBO60941 627 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 ARHGAP29Q52LW3 1261 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
UBAP1-202ENST00000359544 ZRANB2O95218 330 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBAP1-202ENST00000359544 CCDC150Q8NCX0 1101 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
UBAP1-202ENST00000359544 EFCC1Q9HA90 598 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 APBA3O96018 575 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 TPM1P09493 284 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 SF3B2Q13435 895 aaKnown RBP17.41■□□□□ 0.38
UBAP1-202ENST00000359544 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
UBAP1-202ENST00000359544 SYTL4Q96C24 671 aaPredicted RBP17.41■□□□□ 0.38
UBAP1-202ENST00000359544 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 PPP1R13BQ96KQ4 1090 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 CYP27B1O15528 508 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 CCP110O43303 1012 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 TRERF1Q96PN7 1200 aa17.4■□□□□ 0.38
UBAP1-202ENST00000359544 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
UBAP1-202ENST00000359544 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
UBAP1-202ENST00000359544 SYT10Q6XYQ8 523 aa17.39■□□□□ 0.37
UBAP1-202ENST00000359544 DHX40Q8IX18 779 aaKnown RBP17.39■□□□□ 0.37
UBAP1-202ENST00000359544 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
UBAP1-202ENST00000359544 UBXN4Q92575 508 aa17.39■□□□□ 0.37
UBAP1-202ENST00000359544 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
UBAP1-202ENST00000359544 TNNT3P45378 269 aaPredicted RBP17.39■□□□□ 0.37
UBAP1-202ENST00000359544 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
UBAP1-202ENST00000359544 RASSF4Q9H2L5 321 aa17.39■□□□□ 0.37
UBAP1-202ENST00000359544 CWC15Q9P013 229 aaKnown RBP17.39■□□□□ 0.37
UBAP1-202ENST00000359544 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
UBAP1-202ENST00000359544 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
UBAP1-202ENST00000359544 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-202ENST00000359544 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
UBAP1-202ENST00000359544 E4F1Q66K89 784 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-202ENST00000359544 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
UBAP1-202ENST00000359544 ORC3Q9UBD5 711 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-202ENST00000359544 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
UBAP1-202ENST00000359544 HIP1O00291 1037 aa17.38■□□□□ 0.37
UBAP1-202ENST00000359544 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-202ENST00000359544 SRGAP3O43295 1099 aa17.37■□□□□ 0.37
UBAP1-202ENST00000359544 RESTQ13127 1097 aa17.37■□□□□ 0.37
UBAP1-202ENST00000359544 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
UBAP1-202ENST00000359544 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
UBAP1-202ENST00000359544 KRBA2Q6ZNG9 492 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 CCDC73Q6ZRK6 1079 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 ADCY9O60503 1353 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 POLR3GO15318 223 aaPredicted RBP17.36■□□□□ 0.37
UBAP1-202ENST00000359544 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
UBAP1-202ENST00000359544 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 SLC27A2O14975 620 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 KINO60870 393 aaKnown RBP17.35■□□□□ 0.37
UBAP1-202ENST00000359544 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBAP1-202ENST00000359544 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 H3BQV1 296 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 CCAR1Q8IX12 1150 aaKnown RBP17.35■□□□□ 0.37
UBAP1-202ENST00000359544 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
UBAP1-202ENST00000359544 AOPEPQ8N6M6 819 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 LRRN4CLQ8ND94 238 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
UBAP1-202ENST00000359544 EFCAB8A8MWE9 144 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
UBAP1-202ENST00000359544 CTR9Q6PD62 1173 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 HOMER1Q86YM7 354 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 AK7Q96M32 723 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 BAG6P46379 1132 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 KCNQ4P56696 695 aa17.34■□□□□ 0.37
UBAP1-202ENST00000359544 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
UBAP1-202ENST00000359544 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
UBAP1-202ENST00000359544 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
UBAP1-202ENST00000359544 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
UBAP1-202ENST00000359544 TOB2Q14106 344 aaPredicted RBP17.32■□□□□ 0.36
UBAP1-202ENST00000359544 ZSCAN26Q16670 478 aa17.32■□□□□ 0.36
UBAP1-202ENST00000359544 SMARCE1Q969G3 411 aa17.32■□□□□ 0.36
UBAP1-202ENST00000359544 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms