RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PDE4BQ07343 736 aa13.99□□□□□ -0.17
DNMT1-202ENST00000359526 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
DNMT1-202ENST00000359526 MAST3O60307 1309 aa13.99□□□□□ -0.17
DNMT1-202ENST00000359526 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
DNMT1-202ENST00000359526 BIN1O00499 593 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
DNMT1-202ENST00000359526 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 MEIS3Q99687 375 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 CNPY2Q9Y2B0 182 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 GNG11P61952 73 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
DNMT1-202ENST00000359526 SMC1AQ14683 1233 aaKnown RBP13.98□□□□□ -0.17
DNMT1-202ENST00000359526 ANO6Q4KMQ2 910 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 AGLP35573 1532 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
DNMT1-202ENST00000359526 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
DNMT1-202ENST00000359526 SKILP12757 684 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 UBASH3AP57075 661 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 IFI16Q16666 785 aaKnown RBP13.97□□□□□ -0.17
DNMT1-202ENST00000359526 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
DNMT1-202ENST00000359526 KRT23Q9C075 422 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 FAM83GA6ND36 823 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 RNF187Q5TA31 235 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-202ENST00000359526 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
DNMT1-202ENST00000359526 BRF1Q92994 677 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 ZNF830Q96NB3 372 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-202ENST00000359526 CETN1Q12798 172 aa13.97□□□□□ -0.17
DNMT1-202ENST00000359526 PDE6BP35913 854 aa13.96□□□□□ -0.17
DNMT1-202ENST00000359526 MNAT1P51948 309 aa13.96□□□□□ -0.17
DNMT1-202ENST00000359526 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
DNMT1-202ENST00000359526 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
DNMT1-202ENST00000359526 UBA7P41226 1012 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 RAD50Q92878 1312 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 NF2P35240 595 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 STXBP4Q6ZWJ1 553 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 TICAM2Q86XR7 235 aa13.96□□□□□ -0.18
DNMT1-202ENST00000359526 THRAP3Q9Y2W1 955 aaKnown RBP13.96□□□□□ -0.18
DNMT1-202ENST00000359526 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
DNMT1-202ENST00000359526 ATL3Q6DD88 541 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 ADGRB3O60242 1522 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 GNAQP50148 359 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 CDC42BPAQ5VT25 1732 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-202ENST00000359526 SSR1P43307 286 aaKnown RBP13.95□□□□□ -0.18
DNMT1-202ENST00000359526 LDHAL6AQ6ZMR3 332 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 SLC26A6Q9BXS9 759 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 N4BP3O15049 544 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 CYLC1P35663 651 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-202ENST00000359526 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
DNMT1-202ENST00000359526 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 MATR3P43243 847 aaKnown RBP eCLIP13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 TSHZ3Q63HK5 1081 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 ARFGAP3Q9NP61 516 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
DNMT1-202ENST00000359526 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 DACT1Q9NYF0 836 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 IVLP07476 585 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CEP112Q8N8E3 955 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CTAGE15A4D2H0 777 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 ZBTB43O43298 467 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 SLU7O95391 586 aaKnown RBP13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CTAGE8P0CG41 777 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 BAG6P46379 1132 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 PRIM1P49642 420 aaKnown RBP13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CTAGE6Q86UF2 777 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 CTAGE4Q8IX94 777 aa13.94□□□□□ -0.18
DNMT1-202ENST00000359526 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-202ENST00000359526 DZIP3Q86Y13 1208 aaKnown RBP13.93□□□□□ -0.18
DNMT1-202ENST00000359526 KAT14Q9H8E8 782 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 CEP85Q6P2H3 762 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-202ENST00000359526 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 GRM8O00222 908 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 VAMP4O75379 141 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 CCDC175P0C221 793 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 ALG1Q9BT22 464 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
DNMT1-202ENST00000359526 TUBBP07437 444 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 TYRO3Q06418 890 aa13.93□□□□□ -0.18
DNMT1-202ENST00000359526 WTAPQ15007 396 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms