RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CCNL1Q9UK58 526 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-202ENST00000359366 COL4A1P02462 1669 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 MAP3K13O43283 966 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATXN3-202ENST00000359366 METTL24Q5JXM2 366 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 USPL1Q5W0Q7 1092 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 EVI5LQ96CN4 794 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 CNNM1Q9NRU3 951 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 CEP126Q9P2H0 1117 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 ANKRD36CQ5JPF3 1778 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 ERVV-1B6SEH8 477 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 K7ELQ4 463 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 TRIM37O94972 964 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 CSF1RP07333 972 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 IL15P40933 162 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 RABEP1Q15276 862 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 ERFEQ4G0M1 354 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 GORABQ5T7V8 394 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 TBC1D9BQ66K14 1250 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 PRPF40BQ6NWY9 871 aaKnown RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 ZGPATQ8N5A5 531 aaKnown RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 BBXQ8WY36 941 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 TCEANC2Q96MN5 208 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 LRRC4BQ9NT99 713 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 MYH3P11055 1940 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 PDE8AO60658 829 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 PKP1Q13835 747 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 ADCK5Q3MIX3 580 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 FOXD4L5Q5VV16 416 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 KIAA1211Q6ZU35 1233 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 FOXD4L4Q8WXT5 416 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 SNX21Q969T3 373 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 XAGE2Q96GT9 111 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 CHAMP1Q96JM3 812 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 TRPC5Q9UL62 973 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-202ENST00000359366 SPEF2Q9C093 1822 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 SH3TC1Q8TE82 1336 aa6.13□□□□□ -1.43
ATXN3-202ENST00000359366 A0A0G2JLW4 131 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ANKRD18BA2A2Z9 1011 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 NTSR2O95665 410 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ATP5JP18859 108 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 RIPOR2Q9Y4F9 1068 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 SNX14Q9Y5W7 946 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 THSD7AQ9UPZ6 1657 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 COL5A3P25940 1745 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ZNF609O15014 1411 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 RIC1Q4ADV7 1423 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 RAD50Q92878 1312 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 IFIT1P09914 478 aaKnown RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 KCNJ4P48050 445 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ATP2B3Q16720 1220 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 VPS53Q5VIR6 699 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 FAM196AQ6ZSG2 479 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 PLA2G12BQ9BX93 195 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 PAG1Q9NWQ8 432 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 CDHR2Q9BYE9 1310 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 MCCP23508 829 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 GTF2E1P29083 439 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 HSPA4P34932 840 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 PTGER2P43116 358 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ZAP70P43403 619 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 ARHGEF1Q92888 912 aaKnown RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 HAUS7Q99871 368 aa6.12□□□□□ -1.43
ATXN3-202ENST00000359366 RBM8AQ9Y5S9 174 aaKnown RBP6.12□□□□□ -1.43
ATXN3-202ENST00000359366 MYO5AQ9Y4I1 1855 aaKnown RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 ATRNO75882 1429 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 BRWD3Q6RI45 1802 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 SBF2Q86WG5 1849 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 ABCC12Q96J65 1359 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 CIAO1O76071 339 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 CASTP20810 708 aaKnown RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 PHKA1P46020 1223 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 JAKMIP1Q96N16 626 aaKnown RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 CCDC171Q6TFL3 1326 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 ZPR1O75312 459 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 SSFA2P28290 1259 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 MCAMP43121 646 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 FOXD4L6Q3SYB3 417 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 FOXD4L3Q6VB84 417 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 RUFY2Q8WXA3 655 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 MPHOSPH8Q99549 860 aa6.11□□□□□ -1.43
ATXN3-202ENST00000359366 RTCBQ9Y3I0 505 aaKnown RBP6.11□□□□□ -1.43
ATXN3-202ENST00000359366 DDX60Q8IY21 1712 aaKnown RBP6.1□□□□□ -1.43
ATXN3-202ENST00000359366 M0R2C6 588 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 NPHP1O15259 732 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 RPS6KA4O75676 772 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 DDIT3P35638 169 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 CREB3L3Q68CJ9 461 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 KRT27Q7Z3Y8 459 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 NBPF5PQ86XG9 351 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-202ENST00000359366 VGLL2Q8N8G2 317 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 TMX3Q96JJ7 454 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 CHMP5Q9NZZ3 219 aa6.1□□□□□ -1.43
ATXN3-202ENST00000359366 PRDM4Q9UKN5 801 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms