RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
XRCC6-201ENST00000359308 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 PDLIM2Q96JY6 352 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 TFIP11Q9UBB9 837 aaKnown RBP16.24■□□□□ 0.19
XRCC6-201ENST00000359308 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
XRCC6-201ENST00000359308 SPEF2Q9C093 1822 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
XRCC6-201ENST00000359308 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 RIPOR2Q9Y4F9 1068 aa16.24■□□□□ 0.19
XRCC6-201ENST00000359308 CCT2P78371 535 aaKnown RBP16.23■□□□□ 0.19
XRCC6-201ENST00000359308 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
XRCC6-201ENST00000359308 SLIT2O94813 1529 aa16.23■□□□□ 0.19
XRCC6-201ENST00000359308 KRT85P78386 507 aa16.23■□□□□ 0.19
XRCC6-201ENST00000359308 PLCH1Q4KWH8 1693 aa16.23■□□□□ 0.19
XRCC6-201ENST00000359308 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
XRCC6-201ENST00000359308 PUS7LQ9H0K6 701 aaKnown RBP16.23■□□□□ 0.19
XRCC6-201ENST00000359308 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
XRCC6-201ENST00000359308 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
XRCC6-201ENST00000359308 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
XRCC6-201ENST00000359308 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
XRCC6-201ENST00000359308 MCAMP43121 646 aa16.22■□□□□ 0.19
XRCC6-201ENST00000359308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.22■□□□□ 0.19
XRCC6-201ENST00000359308 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
XRCC6-201ENST00000359308 WNK3Q9BYP7 1800 aa16.22■□□□□ 0.19
XRCC6-201ENST00000359308 MYH7P12883 1935 aa16.21■□□□□ 0.19
XRCC6-201ENST00000359308 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
XRCC6-201ENST00000359308 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.19
XRCC6-201ENST00000359308 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
XRCC6-201ENST00000359308 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
XRCC6-201ENST00000359308 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
XRCC6-201ENST00000359308 SNAP23O00161 211 aa16.2■□□□□ 0.18
XRCC6-201ENST00000359308 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
XRCC6-201ENST00000359308 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
XRCC6-201ENST00000359308 LIG1P18858 919 aa16.2■□□□□ 0.18
XRCC6-201ENST00000359308 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
XRCC6-201ENST00000359308 VGLL2Q8N8G2 317 aa16.2■□□□□ 0.18
XRCC6-201ENST00000359308 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
XRCC6-201ENST00000359308 PFKFB2O60825 505 aa16.19■□□□□ 0.18
XRCC6-201ENST00000359308 H3BQV1 296 aa16.19■□□□□ 0.18
XRCC6-201ENST00000359308 IL6STP40189 918 aaPredicted RBP16.19■□□□□ 0.18
XRCC6-201ENST00000359308 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
XRCC6-201ENST00000359308 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
XRCC6-201ENST00000359308 PTPDC1A2A3K4 754 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 FGAP02671 866 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 PHKA1P46020 1223 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 MPNDQ8N594 471 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 APPBP2Q92624 585 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 GPAA1O43292 621 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 PDE8AO60658 829 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 DDB1Q16531 1140 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 CAMK4Q16566 473 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 CEBPZQ03701 1054 aaKnown RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 RESTQ13127 1097 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 INTS5Q6P9B9 1019 aaKnown RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
XRCC6-201ENST00000359308 USP25Q9UHP3 1055 aa16.18■□□□□ 0.18
XRCC6-201ENST00000359308 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 PDE8BO95263 885 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 ZNF34Q8IZ26 560 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 FTOQ9C0B1 505 aaKnown RBP eCLIP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 DENND2AQ9ULE3 1009 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 SPATA31A1Q5TZJ5 1347 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 ZFYP08048 801 aaPredicted RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 PDIA3P30101 505 aaKnown RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
XRCC6-201ENST00000359308 FUCA2Q9BTY2 467 aa16.17■□□□□ 0.18
XRCC6-201ENST00000359308 ERVV-1B6SEH8 477 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
XRCC6-201ENST00000359308 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 CCDC102BQ68D86 513 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 NAP1L5Q96NT1 182 aaPredicted RBP16.16■□□□□ 0.18
XRCC6-201ENST00000359308 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
XRCC6-201ENST00000359308 ITPK1Q13572 414 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
XRCC6-201ENST00000359308 LRRFIP1Q32MZ4 808 aaKnown RBP16.16■□□□□ 0.18
XRCC6-201ENST00000359308 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
XRCC6-201ENST00000359308 ELP1O95163 1332 aa16.15■□□□□ 0.18
XRCC6-201ENST00000359308 PGBD1Q96JS3 809 aa16.15■□□□□ 0.18
XRCC6-201ENST00000359308 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
XRCC6-201ENST00000359308 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
XRCC6-201ENST00000359308 SCAND2PQ9GZW5 306 aaPredicted RBP16.15■□□□□ 0.18
XRCC6-201ENST00000359308 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms