RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ABCC5O15440 1437 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 MAGEB6P1A0A0J9YX57 407 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 NDC80O14777 642 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 ATRIPQ8WXE1 791 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 PSMC4P43686 418 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
SHANK1-202ENST00000359082 CCDC160A6NGH7 325 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 CAVIN2O95810 425 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 BMP15O95972 392 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 PSMA7O14818 248 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 CCDC129Q6ZRS4 1044 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 HDAC9Q9UKV0 1011 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 NOS1P29475 1434 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 DNM1Q05193 864 aaKnown RBP20.85■□□□□ 0.93
SHANK1-202ENST00000359082 ATP2B3Q16720 1220 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 ZGPATQ8N5A5 531 aaKnown RBP20.85■□□□□ 0.93
SHANK1-202ENST00000359082 XAGE3Q8WTP9 111 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 MEIS3Q99687 375 aa20.85■□□□□ 0.93
SHANK1-202ENST00000359082 FBLN1P23142 703 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 PRPHP41219 470 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 NMIQ13287 307 aaPredicted RBP20.84■□□□□ 0.93
SHANK1-202ENST00000359082 WDR70Q9NW82 654 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 UBXN1Q04323 297 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 NOLC1Q14978 699 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHANK1-202ENST00000359082 KRT222Q8N1A0 295 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 TMTC2Q8N394 836 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 KRT2P35908 639 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 SETDB2Q96T68 719 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 OPA1O60313 960 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
SHANK1-202ENST00000359082 ESYT1Q9BSJ8 1104 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHANK1-202ENST00000359082 V9GYY5 206 aaPredicted RBP20.84■□□□□ 0.93
SHANK1-202ENST00000359082 ARFGAP3Q9NP61 516 aa20.84■□□□□ 0.93
SHANK1-202ENST00000359082 MCM7P33993 719 aa20.83■□□□□ 0.93
SHANK1-202ENST00000359082 CCDC77Q9BR77 488 aa20.83■□□□□ 0.93
SHANK1-202ENST00000359082 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.93
SHANK1-202ENST00000359082 DACT1Q9NYF0 836 aa20.83■□□□□ 0.93
SHANK1-202ENST00000359082 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.93
SHANK1-202ENST00000359082 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.93
SHANK1-202ENST00000359082 KARSQ15046 597 aaKnown RBP20.83■□□□□ 0.93
SHANK1-202ENST00000359082 SLC9C2Q5TAH2 1124 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 TCHPQ9BT92 498 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 PLCB3Q01970 1234 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 DMRT2Q9Y5R5 561 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.92
SHANK1-202ENST00000359082 PLIN2Q99541 437 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 ZMYND15Q9H091 742 aa20.83■□□□□ 0.92
SHANK1-202ENST00000359082 F13A1P00488 732 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 STMN4Q9H169 189 aaPredicted RBP20.82■□□□□ 0.92
SHANK1-202ENST00000359082 ACEP12821 1306 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 LMBR1Q8WVP7 490 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 C6orf50Q9HD87 102 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 STX17P56962 302 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 ZNF804AQ7Z570 1209 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 SLC39A6Q13433 755 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 TIGD1Q96MW7 591 aa20.82■□□□□ 0.92
SHANK1-202ENST00000359082 GOLGA1Q92805 767 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 VEZTQ9HBM0 779 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 NSD2O96028 1365 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 PAG1Q9NWQ8 432 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 ZBTB16Q05516 673 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 IFT81Q8WYA0 676 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 GUCA1BQ9UMX6 200 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 COPS6Q7L5N1 327 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 ANKS4BQ8N8V4 417 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 NEK11Q8NG66 645 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 UBE2Q2Q8WVN8 375 aa20.81■□□□□ 0.92
SHANK1-202ENST00000359082 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
SHANK1-202ENST00000359082 SPAG1Q07617 926 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 CLEC11AQ9Y240 323 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 SCAF11Q99590 1463 aaKnown RBP20.8■□□□□ 0.92
SHANK1-202ENST00000359082 PDE1AP54750 535 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 KRT83P78385 493 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 FAM200AQ8TCP9 573 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 CFAP57Q96MR6 1250 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
SHANK1-202ENST00000359082 SPDYE3A6NKU9 549 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 ATP2A1O14983 1001 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 TNNI2P48788 182 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 GNAQP50148 359 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 CCDC114Q96M63 670 aa20.8■□□□□ 0.92
SHANK1-202ENST00000359082 LMOD1P29536 600 aaPredicted RBP20.79■□□□□ 0.92
SHANK1-202ENST00000359082 APOBRQ0VD83 1088 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 SMC6Q96SB8 1091 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 MAGEB6Q8N7X4 407 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 LZTFL1Q9NQ48 299 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 MAP7D1Q3KQU3 841 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 CCDC25Q86WR0 208 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 KIF5AQ12840 1032 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 DAAM2Q86T65 1068 aa20.79■□□□□ 0.92
SHANK1-202ENST00000359082 FANCAO15360 1455 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 SPTLC2O15270 562 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 LMBR1LQ6UX01 489 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 DNAJC21Q5F1R6 531 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms