RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
TRAPPC4-201ENST00000359005 MYH3P11055 1940 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
TRAPPC4-201ENST00000359005 RFX7Q2KHR2 1363 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 RTL9Q8NET4 1388 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 CHMLP26374 656 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 RABEP1Q15276 862 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 SOGA3Q5TF21 947 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-201ENST00000359005 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
TRAPPC4-201ENST00000359005 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-201ENST00000359005 NLRP3Q96P20 1036 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
TRAPPC4-201ENST00000359005 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 RAD50Q92878 1312 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 ITGA6P23229 1130 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 ANAPC15P60006 121 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 SBF1O95248 1867 aa12.99□□□□□ -0.33
TRAPPC4-201ENST00000359005 FZD9O00144 591 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 ST18O60284 1047 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 SNX21Q969T3 373 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 PSMD1Q99460 953 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 USP26Q9BXU7 913 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 COL4A5P29400 1685 aa12.98□□□□□ -0.33
TRAPPC4-201ENST00000359005 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 LAMB2P55268 1798 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 FSTL1Q12841 308 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 ATG9AQ7Z3C6 839 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 FSD1Q9BTV5 496 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 ANO2Q9NQ90 1003 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
TRAPPC4-201ENST00000359005 MCM2P49736 904 aa12.96□□□□□ -0.33
TRAPPC4-201ENST00000359005 APLP1P51693 650 aa12.96□□□□□ -0.33
TRAPPC4-201ENST00000359005 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
TRAPPC4-201ENST00000359005 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-201ENST00000359005 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 HAUS7Q99871 368 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 GREM2Q9H772 168 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZNF609O15014 1411 aa12.95□□□□□ -0.34
TRAPPC4-201ENST00000359005 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 SGSM2O43147 1006 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 BBOX1O75936 387 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 UQCRFS1P1P0C7P4 283 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 GRAPQ13588 217 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-201ENST00000359005 PDE8BO95263 885 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZFYP08048 801 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 SLC5A1P13866 664 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 AOC3Q16853 763 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 LPIN2Q92539 896 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZNF512BQ96KM6 892 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 COL4A1P02462 1669 aa12.93□□□□□ -0.34
TRAPPC4-201ENST00000359005 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms