RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ATP6V1AP38606 617 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 PIP4K2AP48426 406 aaPredicted RBP10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 SLC39A6Q13433 755 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 SUGP1Q8IWZ8 645 aaKnown RBP10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
SMARCAL1-202ENST00000358207 CLCN6P51797 869 aa10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 MAP9Q49MG5 647 aa10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 MCTP2Q6DN12 878 aa10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 DZIP1LQ8IYY4 767 aaKnown RBP10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 ACSBG1Q96GR2 724 aa10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 IFT57Q9NWB7 429 aa10.96□□□□□ -0.66
SMARCAL1-202ENST00000358207 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 PPP1R12AO14974 1030 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 TEX35Q5T0J7 233 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 G2E3Q7L622 706 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 GDPD2Q9HCC8 539 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 TPM3P06753 285 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 MAP2K2P36507 400 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 COL23A1Q86Y22 540 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 FER1L6Q2WGJ9 1857 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 USP26Q9BXU7 913 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 LNPKQ9C0E8 428 aa10.95□□□□□ -0.66
SMARCAL1-202ENST00000358207 APBB1O00213 710 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 CEP135Q66GS9 1140 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 ATF7IPQ6VMQ6 1270 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 GOLGA5Q8TBA6 731 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 SYAP1Q96A49 352 aaPredicted RBP10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 CWC15Q9P013 229 aaKnown RBP10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 WDR90Q96KV7 1748 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 TEFQ10587 303 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 RPAINQ86UA6 219 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZRANB2O95218 330 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 NBPF10Q6P3W6 841 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 FOXR1Q6PIV2 292 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 ANKRD20A12PQ8NF67 263 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 PIGBQ92521 554 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 NRBP1Q9UHY1 535 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 EIF3CLB5ME19 914 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 ERCC6LQ2NKX8 1250 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 EIF3CQ99613 913 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 RABEP1Q15276 862 aa10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 FOXD4L6Q3SYB3 417 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 FOXD4L3Q6VB84 417 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-202ENST00000358207 USP27XA6NNY8 438 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 CHL1O00533 1208 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 SCP2P22307 547 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 TPD52L1Q16890 204 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 IQUBQ8NA54 791 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 TPM4P67936 248 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 NBPF9Q3BBW0 867 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
SMARCAL1-202ENST00000358207 ATP10DQ9P241 1426 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 NUCB1Q02818 461 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 MMS22LQ6ZRQ5 1243 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 ANKRD36CQ5JPF3 1778 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 IL16Q14005 1332 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZC3H4Q9UPT8 1303 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 RIC1Q4ADV7 1423 aa10.91□□□□□ -0.66
SMARCAL1-202ENST00000358207 LOC102724428A0A0B4J2F2 783 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 BRD1O95696 1058 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 SIK1P57059 783 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 TGFB2P61812 414 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 PLEKHO1Q53GL0 409 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 USP48Q86UV5 1035 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 JMYQ8N9B5 988 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 KLHL33A6NCF5 533 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 OAS2P29728 719 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZSCAN25Q6NSZ9 544 aa10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 ZSCAN16Q9H4T2 348 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms