RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GSDMDP57764 484 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 UBE3BQ7Z3V4 1068 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 TTC5Q8N0Z6 440 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 ARID3AQ99856 593 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 EVCP57679 992 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 ZMYM1Q5SVZ6 1142 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 CCDC129Q6ZRS4 1044 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 CTDNEP1O95476 244 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 ATP2B3Q16720 1220 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 CCDC144BQ3MJ40 725 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 CCDC144CPQ8IYA2 1237 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.71■□□□□ 0.914e-6■■□□□ 11.4
RTN4-204ENST00000357732 DDX17Q92841 729 aaKnown RBP20.71■□□□□ 0.91
RTN4-204ENST00000357732 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
RTN4-204ENST00000357732 PAG1Q9NWQ8 432 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 NDUFB9Q9Y6M9 179 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 A0A087WZG4 1122 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 CEP135Q66GS9 1140 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 C11orf57Q6ZUT1 292 aaPredicted RBP20.71■□□□□ 0.91
RTN4-204ENST00000357732 BPIFA3Q9BQP9 254 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 OGFRQ9NZT2 677 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 IMPACTQ9P2X3 320 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 ALS2Q96Q42 1657 aa20.71■□□□□ 0.91
RTN4-204ENST00000357732 LRRFIP1Q32MZ4 808 aaKnown RBP20.7■□□□□ 0.9
RTN4-204ENST00000357732 DDX46Q7L014 1031 aaKnown RBP20.7■□□□□ 0.9
RTN4-204ENST00000357732 CBX1P83916 185 aa20.7■□□□□ 0.9
RTN4-204ENST00000357732 NYAP1Q6ZVC0 841 aa20.7■□□□□ 0.9
RTN4-204ENST00000357732 USP28Q96RU2 1077 aa20.7■□□□□ 0.9
RTN4-204ENST00000357732 RTEL1Q9NZ71 1219 aa20.7■□□□□ 0.9
RTN4-204ENST00000357732 PKD1L3Q7Z443 1732 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 PARP4Q9UKK3 1724 aaKnown RBP20.69■□□□□ 0.9
RTN4-204ENST00000357732 FAM177BA6PVY3 158 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 CHGBP05060 677 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 IL15P40933 162 aaPredicted RBP20.69■□□□□ 0.9
RTN4-204ENST00000357732 ADALQ6DHV7 355 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 DHX40Q8IX18 779 aaKnown RBP20.69■□□□□ 0.9
RTN4-204ENST00000357732 GOLPH3LQ9H4A5 285 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
RTN4-204ENST00000357732 KIF20AO95235 890 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 MRPS27Q92552 414 aaKnown RBP20.68■□□□□ 0.9
RTN4-204ENST00000357732 E7EWF7 191 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 H7C1W4 665 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
RTN4-204ENST00000357732 CSB-PGBD3P0DP91 1061 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 CARMIL3Q8ND23 1372 aa20.68■□□□□ 0.9
RTN4-204ENST00000357732 CYP27B1O15528 508 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 TUBB4AP04350 444 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 PDIA3P30101 505 aaKnown RBP20.67■□□□□ 0.9
RTN4-204ENST00000357732 APOBRQ0VD83 1088 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 PTPN14Q15678 1187 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 OSBPL5Q9H0X9 879 aaPredicted RBP20.67■□□□□ 0.9
RTN4-204ENST00000357732 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 HSPD1P10809 573 aaKnown RBP20.67■□□□□ 0.9
RTN4-204ENST00000357732 SKILP12757 684 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 KCNJ6P48051 423 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 ME1P48163 572 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
RTN4-204ENST00000357732 FSIP1Q8NA03 581 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
RTN4-204ENST00000357732 DHX16O60231 1041 aaKnown RBP20.66■□□□□ 0.9
RTN4-204ENST00000357732 YEATS4O95619 227 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 LMBR1LQ6UX01 489 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 CABLES1Q8TDN4 633 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 GLI3P10071 1580 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 CIAO1O76071 339 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 FOXO4P98177 505 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 ATG9AQ7Z3C6 839 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 LRRC2Q9BYS8 371 aa20.66■□□□□ 0.9
RTN4-204ENST00000357732 GOLIM4O00461 696 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 RNF113AO15541 343 aaKnown RBP20.65■□□□□ 0.9
RTN4-204ENST00000357732 CCZ1BP86790 482 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 CCZ1P86791 482 aaPredicted RBP20.65■□□□□ 0.9
RTN4-204ENST00000357732 CEBPZQ03701 1054 aaKnown RBP20.65■□□□□ 0.9
RTN4-204ENST00000357732 CHRNA2Q15822 529 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 CCDC69A6NI79 296 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 U2AF2P26368 475 aaKnown RBP eCLIP20.65■□□□□ 0.97e-8■■□□□ 13
RTN4-204ENST00000357732 BRAPQ7Z569 592 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 POLR3EQ9NVU0 708 aa20.65■□□□□ 0.9
RTN4-204ENST00000357732 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.89
RTN4-204ENST00000357732 MAST3O60307 1309 aa20.64■□□□□ 0.89
RTN4-204ENST00000357732 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.89
RTN4-204ENST00000357732 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
RTN4-204ENST00000357732 CCDC150Q8NCX0 1101 aa20.64■□□□□ 0.89
RTN4-204ENST00000357732 COL18A1P39060 1754 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 WDR19Q8NEZ3 1342 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 ZFYP08048 801 aaPredicted RBP20.63■□□□□ 0.89
RTN4-204ENST00000357732 FBXO3Q9UK99 471 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 PCDHA7Q9UN72 937 aa20.63■□□□□ 0.89
RTN4-204ENST00000357732 CCDC9Q9Y3X0 531 aaKnown RBP20.63■□□□□ 0.89
RTN4-204ENST00000357732 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms