RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 XIRP1Q702N8 1843 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 FSIP1Q8NA03 581 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 ZNF396Q96N95 335 aaPredicted RBP14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 KIAA1468Q9P260 1216 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 HEG1Q9ULI3 1381 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 CCP110O43303 1012 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TPM4P67936 248 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 CEBPZQ03701 1054 aaKnown RBP14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 DPCR1Q3MIW9 517 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 ADALQ6DHV7 355 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TMCO3Q6UWJ1 677 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TXLNBQ8N3L3 684 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 CCDC8Q9H0W5 538 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 HSD3B7Q9H2F3 369 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TMC6Q7Z403 805 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 BOLA2Q9H3K6 86 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 RTEL1Q9NZ71 1219 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 IFNKQ9P0W0 207 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 PCDHA7Q9UN72 937 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 PARP3Q9Y6F1 533 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 PHRF1Q9P1Y6 1649 aaKnown RBP14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 ZNF609O15014 1411 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 MST1RQ04912 1400 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 SASH3O75995 380 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 CYP21A2P08686 494 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TPM1P09493 284 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 PSME1Q06323 249 aa14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 MRPS27Q92552 414 aaKnown RBP14.09□□□□□ -0.15
SMARCAL1-201ENST00000357276 TEX35Q5T0J7 233 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 REXO1L1PQ8IX06 675 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 UBXN4Q92575 508 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 DNAI1Q9UI46 699 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 SIPA1L3O60292 1781 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 LTN1O94822 1766 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 C9orf78Q9NZ63 289 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 DDX60Q8IY21 1712 aaKnown RBP14.08□□□□□ -0.16
SMARCAL1-201ENST00000357276 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 ERCC4Q92889 916 aaPredicted RBP14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 EXOSC10Q01780 885 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 STOX1Q6ZVD7 989 aa14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 FCHSD1Q86WN1 690 aa14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 IKBKBO14920 756 aa14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 KCNQ3O43525 872 aa14.07□□□□□ -0.16
SMARCAL1-201ENST00000357276 ANXA1P04083 346 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 ATP5JP18859 108 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 NDUFA8P51970 172 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 NLRP12P59046 1061 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 SMARCE1Q969G3 411 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 BICC1Q9H694 974 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 PSD3Q9NYI0 1048 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 GRM8O00222 908 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 HMGB1P09429 215 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 ME1P48163 572 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 ST5P78524 1137 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 RSRC2Q7L4I2 434 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 NEK11Q8NG66 645 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 LGR6Q9HBX8 967 aa14.06□□□□□ -0.16
SMARCAL1-201ENST00000357276 CWF19L2Q2TBE0 894 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 SMC2O95347 1197 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 MAP3K9P80192 1104 aa14.05□□□□□ -0.16
SMARCAL1-201ENST00000357276 NRDCO43847 1150 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 FBXL16Q8N461 479 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 GPR161Q8N6U8 529 aaKnown RBP14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 IQUBQ8NA54 791 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 A0A1B0GVL5 298 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 VWA3AA6NCI4 1184 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 FANCCQ00597 558 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 POLR3EQ9NVU0 708 aa14.04□□□□□ -0.16
SMARCAL1-201ENST00000357276 OAS2P29728 719 aaKnown RBP14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 MPHOSPH8Q99549 860 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 SDF4Q9BRK5 362 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 CARD6Q9BX69 1037 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 TRIM34Q9BYJ4 488 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
SMARCAL1-201ENST00000357276 YEATS4O95619 227 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms