RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 CABLES1Q8TDN4 633 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 NUP133Q8WUM0 1156 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 LZTFL1Q9NQ48 299 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 VPS18Q9P253 973 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 BCCIPQ9P287 314 aaKnown RBP eCLIP14.46□□□□□ -0.09
BDNF-202ENST00000356660 GLI2P10070 1586 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 ERLIN1O75477 346 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 DHX8Q14562 1220 aaKnown RBP14.46□□□□□ -0.09
BDNF-202ENST00000356660 SYCP1Q15431 976 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 EFCAB6Q5THR3 1501 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.1
BDNF-202ENST00000356660 TSR1Q2NL82 804 aaKnown RBP14.46□□□□□ -0.1
BDNF-202ENST00000356660 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.1
BDNF-202ENST00000356660 PPP1R13BQ96KQ4 1090 aa14.46□□□□□ -0.1
BDNF-202ENST00000356660 ABCF2Q9UG63 623 aa14.46□□□□□ -0.1
BDNF-202ENST00000356660 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
BDNF-202ENST00000356660 GTF2A1P52655 376 aaPredicted RBP14.45□□□□□ -0.1
BDNF-202ENST00000356660 DPCR1Q3MIW9 517 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 ACBD3Q9H3P7 528 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 GYS2P54840 703 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 ETF1P62495 437 aaKnown RBP14.45□□□□□ -0.1
BDNF-202ENST00000356660 KSR2Q6VAB6 950 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 KRT28Q7Z3Y7 464 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 RSPH14Q9UHP6 348 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 DHX32Q7L7V1 743 aaKnown RBP14.45□□□□□ -0.1
BDNF-202ENST00000356660 TEX2Q8IWB9 1127 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
BDNF-202ENST00000356660 TAF6LQ9Y6J9 622 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 ABCC3O15438 1527 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 RASSF4Q9H2L5 321 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 CPSF1Q10570 1443 aaKnown RBP14.44□□□□□ -0.1
BDNF-202ENST00000356660 FLT4P35916 1363 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 PNMA6AP0CW24 399 aaPredicted RBP14.44□□□□□ -0.1
BDNF-202ENST00000356660 SMC1AQ14683 1233 aaKnown RBP14.44□□□□□ -0.1
BDNF-202ENST00000356660 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 BEND3Q5T5X7 828 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 IFIT1P09914 478 aaKnown RBP14.44□□□□□ -0.1
BDNF-202ENST00000356660 RHOXF2BP0C7M4 288 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 RXRAP19793 462 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 SCRN1Q12765 414 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 TFCP2Q12800 502 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 ZSCAN26Q16670 478 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 KCNG4Q8TDN1 519 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
BDNF-202ENST00000356660 RHOXF2Q9BQY4 288 aa14.44□□□□□ -0.1
BDNF-202ENST00000356660 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 KIF5CO60282 957 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 TCHHQ07283 1943 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 NDUFA8P51970 172 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 PPP2R3AQ06190 1150 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 KIAA1468Q9P260 1216 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 ZNF202O95125 648 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 IMMTQ16891 758 aaKnown RBP14.43□□□□□ -0.1
BDNF-202ENST00000356660 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 METTL24Q5JXM2 366 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 PCDHA7Q9UN72 937 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 MAP3K5Q99683 1374 aa14.43□□□□□ -0.1
BDNF-202ENST00000356660 COL3A1P02461 1466 aaPredicted RBP14.42□□□□□ -0.1
BDNF-202ENST00000356660 SRRTQ9BXP5 876 aaKnown RBP14.42□□□□□ -0.1
BDNF-202ENST00000356660 RESTQ13127 1097 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 TOB2Q14106 344 aaPredicted RBP14.42□□□□□ -0.1
BDNF-202ENST00000356660 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
BDNF-202ENST00000356660 FILIP1LQ4L180 1135 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 ALDH1L1O75891 902 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 COPS6Q7L5N1 327 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 DESI2Q9BSY9 194 aa14.42□□□□□ -0.1
BDNF-202ENST00000356660 ADAMTS2O95450 1211 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 KCNA6P17658 529 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 SPECC1Q5M775 1068 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 IPO7O95373 1038 aaKnown RBP14.41□□□□□ -0.1
BDNF-202ENST00000356660 PIP4K2BP78356 416 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 CCDC102BQ68D86 513 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 RAI14Q9P0K7 980 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 H0YHG0 523 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 TAF5LO75529 589 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 ATP1A3P13637 1013 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 CDC25BP30305 580 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 POLA2Q14181 598 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 GOLGA1Q92805 767 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 BAG1Q99933 345 aaPredicted RBP14.41□□□□□ -0.1
BDNF-202ENST00000356660 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
BDNF-202ENST00000356660 ADKP55263 362 aaKnown RBP14.4□□□□□ -0.1
BDNF-202ENST00000356660 TIMM10P62072 90 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 MTX1Q13505 466 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 ANKRD20A12PQ8NF67 263 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 XAGE3Q8WTP9 111 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 CYP21A2P08686 494 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 MYL5Q02045 173 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
BDNF-202ENST00000356660 IQCB1Q15051 598 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms