RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 RPAP2Q8IXW5 612 aaPredicted RBP9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ESR2Q92731 530 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 SPC25Q9HBM1 224 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TMEM110-MUSTN1A8MSY1 372 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ARID5AQ03989 594 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TFCP2L1Q9NZI6 479 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 GTF3C6Q969F1 213 aa9.55□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NR1I2O75469 434 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CALML3P27482 149 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 SSFA2P28290 1259 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NUP153P49790 1475 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CCT6AP40227 531 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 MUM1L1Q5H9M0 696 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 FRMD4BQ9Y2L6 1034 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 EIF4G3O43432 1585 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CIB2O75838 187 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 UTP14CQ5TAP6 766 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 DBF4Q9UBU7 674 aaPredicted RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 USP25Q9UHP3 1055 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TACC3Q9Y6A5 838 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 DAPK3O43293 454 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 HMG20BQ9P0W2 317 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ATP10BO94823 1461 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 WDR46O15213 610 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CALCOCO1Q9P1Z2 691 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 URI1O94763 535 aaPredicted RBP9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ASIC1P78348 528 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PTPN23Q9H3S7 1636 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 KIF3CO14782 793 aa9.54□□□□□ -0.88
SH3PXD2A-202ENST00000355946 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 EVI5LQ96CN4 794 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CCDC65Q8IXS2 484 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 MCM5P33992 734 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PPFIBP2Q8ND30 876 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NUDT16Q96DE0 195 aaKnown RBP9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TMTC2Q8N394 836 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 FAM200AQ8TCP9 573 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NSD3Q9BZ95 1437 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CYLC1P35663 651 aaPredicted RBP9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 AGTPBP1Q9UPW5 1226 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 N4BP3O15049 544 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CAVIN2O95810 425 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NOX5Q96PH1 765 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 BICDL2A1A5D9 508 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ZNF408Q9H9D4 720 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 CLUL1Q15846 466 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 VPS52Q8N1B4 723 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■□ 24.1
SH3PXD2A-202ENST00000355946 RBM17Q96I25 401 aaKnown RBP9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
SH3PXD2A-202ENST00000355946 XRCC6P12956 609 aaKnown RBP eCLIP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 ERCC5P28715 1186 aaPredicted RBP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TMC6Q7Z403 805 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 EXOC6BQ9Y2D4 811 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 WDR62O43379 1518 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 TRPC3Q13507 836 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 LDHAL6AQ6ZMR3 332 aa9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.88
SH3PXD2A-202ENST00000355946 STIM2Q9P246 746 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 CCT2P78371 535 aaKnown RBP9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 ARHGEF6Q15052 776 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 STK32BQ9NY57 414 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 ZBTB21Q9ULJ3 1066 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 IFT74Q96LB3 600 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 NLRP3Q96P20 1036 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 SEL1L2Q5TEA6 688 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 TAOK1Q7L7X3 1001 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 BIRC3Q13489 604 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 C16orf45Q96MC5 204 aaPredicted RBP9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 DDX19AQ9NUU7 478 aaKnown RBP9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 AFG3L2Q9Y4W6 797 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 MAP3K1Q13233 1512 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 KIF11P52732 1056 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 USP16Q9Y5T5 823 aa9.52□□□□□ -0.89
SH3PXD2A-202ENST00000355946 GOLGA6CA6NDK9 693 aa9.51□□□□□ -0.89
SH3PXD2A-202ENST00000355946 GOLGA6BA6NDN3 693 aa9.51□□□□□ -0.89
SH3PXD2A-202ENST00000355946 PSMA7O14818 248 aa9.51□□□□□ -0.89
SH3PXD2A-202ENST00000355946 GOLGA6DP0CG33 693 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms