RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 PFKFB2O60825 505 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 NDUFA8P51970 172 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 SF3A1Q15459 793 aaKnown RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 ISM2Q6H9L7 571 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 CCDC150Q8NCX0 1101 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 JCADQ9P266 1359 aa17.74■□□□□ 0.43
VAT1-201ENST00000355653 NRDCO43847 1150 aa17.74■□□□□ 0.43
VAT1-201ENST00000355653 UBXN4Q92575 508 aa17.74■□□□□ 0.43
VAT1-201ENST00000355653 KCND1Q9NSA2 647 aa17.74■□□□□ 0.43
VAT1-201ENST00000355653 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
VAT1-201ENST00000355653 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
VAT1-201ENST00000355653 FMR1NBQ8N0W7 255 aaPredicted RBP17.73■□□□□ 0.43
VAT1-201ENST00000355653 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
VAT1-201ENST00000355653 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
VAT1-201ENST00000355653 ZNF609O15014 1411 aa17.73■□□□□ 0.43
VAT1-201ENST00000355653 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
VAT1-201ENST00000355653 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
VAT1-201ENST00000355653 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
VAT1-201ENST00000355653 CYP2C19P33261 490 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 PLA2G4AP47712 749 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 TMCO3Q6UWJ1 677 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 KIAA1468Q9P260 1216 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
VAT1-201ENST00000355653 MCMDC2Q4G0Z9 681 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
VAT1-201ENST00000355653 FAM177A1Q8N128 213 aaPredicted RBP17.72■□□□□ 0.43
VAT1-201ENST00000355653 URI1O94763 535 aaPredicted RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 SEC31AO94979 1220 aaKnown RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 HNRNPH2P55795 449 aaKnown RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 TFCP2Q12800 502 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 STK38Q15208 465 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 DHX32Q7L7V1 743 aaKnown RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 ARGLU1Q9NWB6 273 aaPredicted RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 DDX58O95786 925 aaKnown RBP17.71■□□□□ 0.43
VAT1-201ENST00000355653 TPM4P67936 248 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 PTPN21Q16825 1174 aa17.71■□□□□ 0.43
VAT1-201ENST00000355653 A0A0G2JLW4 131 aa17.71■□□□□ 0.42
VAT1-201ENST00000355653 IP6K1Q92551 441 aa17.71■□□□□ 0.42
VAT1-201ENST00000355653 MYL6BP14649 208 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 ATP5JP18859 108 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 ETF1P62495 437 aaKnown RBP17.7■□□□□ 0.42
VAT1-201ENST00000355653 NEK11Q8NG66 645 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 EPC1Q9H2F5 836 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 PHF8Q9UPP1 1060 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 DBNDD2Q9BQY9 259 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
VAT1-201ENST00000355653 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
VAT1-201ENST00000355653 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
VAT1-201ENST00000355653 ATP1A3P13637 1013 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 CARD6Q9BX69 1037 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 TMX1Q9H3N1 280 aa17.69■□□□□ 0.42
VAT1-201ENST00000355653 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
VAT1-201ENST00000355653 CAPN2P17655 700 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 TEX35Q5T0J7 233 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.68■□□□□ 0.42
VAT1-201ENST00000355653 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 MYH15Q9Y2K3 1946 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 FANCCQ00597 558 aa17.68■□□□□ 0.42
VAT1-201ENST00000355653 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
VAT1-201ENST00000355653 SLIT1O75093 1534 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
VAT1-201ENST00000355653 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 MYD88Q99836 296 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 PDIA3P30101 505 aaKnown RBP17.67■□□□□ 0.42
VAT1-201ENST00000355653 FAM193AP78312 1265 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
VAT1-201ENST00000355653 CREBRFQ8IUR6 639 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 ZCCHC17Q9NP64 241 aaKnown RBP17.67■□□□□ 0.42
VAT1-201ENST00000355653 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 UTYO14607 1347 aa17.67■□□□□ 0.42
VAT1-201ENST00000355653 ZRANB2O95218 330 aaKnown RBP eCLIP17.66■□□□□ 0.42
VAT1-201ENST00000355653 SERPINC1P01008 464 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
VAT1-201ENST00000355653 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 CCDC34Q96HJ3 373 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
VAT1-201ENST00000355653 FANCGO15287 622 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 ZNF202O95125 648 aa17.66■□□□□ 0.42
VAT1-201ENST00000355653 NLRP12P59046 1061 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms